Pairwise Alignments
Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 885 a.a., hypothetical protein from Pseudomonas sp. DMC3
Score = 65.9 bits (159), Expect = 2e-14
Identities = 145/607 (23%), Positives = 227/607 (37%), Gaps = 95/607 (15%)
Query: 1054 TELDELDLPEYTEEDALADSQLE-----PAAESEVEPELELVSEPVTEEAFTELDELDLP 1108
++LD+L + + LA Q + P A + V P + +E T D
Sbjct: 330 SQLDKLQKLIELKNNQLAKMQADGAGAAPGATAAVPPVPAITAELAATPPATPADAAAAS 389
Query: 1109 EYTEEDALADAQLEPAVESEVEPELELASE--PAEEEASTELNEL----DLPEYTEEDAL 1162
T E A+A P E+ VEP +E E PA + NEL L A+
Sbjct: 390 P-TPESAIA-----PPAETPVEPVVEPVVETTPAAADDDKAFNELLTNPILLGLIGGGAV 443
Query: 1163 ADAQL------EPAAESEVESELELASDLEEEEPFTELNELDLPEYTE---EDALADAQL 1213
L A+ E E L +A L EE+ F+ E DLPE + E A +L
Sbjct: 444 VLLLLLLLLARRRKAQQEAEKHLRMARALAEEQEFSA--EQDLPESSFSGLETPAASVKL 501
Query: 1214 E-------PAVESEVEPELELA------TEPAEEEAFPELDELDLPEYTEEDALADAQLE 1260
P V P + A PA E + LD+ A A LE
Sbjct: 502 NTPAPAPAPTPAPVVTPVVMAAPIAAPLVAPAGERSDDVLDKAQSHINAGRLNQAAALLE 561
Query: 1261 PAAEAEVEPELELASDLEEK--ETFTELDELDLPEYTEEDALADAQLEPAAESEVEPELE 1318
E E SDL K E + + + D E +A+ E+ ++
Sbjct: 562 EGVSLEPE-----RSDLRLKLMEVYGQQGDRDAFVAQERQLVANGDNFAKVEA-LKSRFP 615
Query: 1319 LASVLEEEDSFTELDELDLPEYTEKDALADAQLEPAAESEVEPELGDETETLAQETESDA 1378
+V+ +L K+ L D EP A +L +T D
Sbjct: 616 AMAVVAAGGLAAAAVAAELDAQYVKELLQD---EPQAPETAADDL---------DTAFDL 663
Query: 1379 LVADEDLLASVESAVDEVQPELLGATQDVPPTQSLANKAFDEEALHDWLSDNPDGEKPFS 1438
+ D D + V+ A V+PE P L+ + +E + DN D F
Sbjct: 664 SLDDLDNITPVDPA-PAVEPEAPVELDAFPAEDDLSFASVLQEQTE--MKDNLDDLSDFD 720
Query: 1439 FDRPLDAKTIDSAGMDIDAMLQMGGEDWNGFHLTPDQQAQLPDDVPEDEQAIWAS----- 1493
D L A+ + + D +L + +G P + + DVP+D+ + A
Sbjct: 721 LDMDLGAEPSPATLAEDDFLLDLD----DGVKDLPPVETPVVADVPQDDLELPADFDLSL 776
Query: 1494 ---ETPEPQAKPENWGSQEDLLDFDPQRDGYMTIDELMAQVESEEQGLNPDEEELKLDVG 1550
P A+P+ + ++ D ++ + R + + MA+ E + + D+G
Sbjct: 777 ADEMDSNPAAEPDAFAAELDDVNAELDR-----LSQSMAEPSFTEA-----DAAMGDDLG 826
Query: 1551 LDEFPDVIGDIRDIDVDSGAEAAGKLDLAKIYIEMNDEKGAIKLLEEAIVDGDDEIRQQA 1610
D+F + G EAA KLDLA+ YI+M D GA +L E + +GD++ R +A
Sbjct: 827 EDDFDFLAGT---------DEAATKLDLAQAYIDMGDADGARDILNEVLTEGDEKQRGEA 877
Query: 1611 KRLIDVL 1617
K ++ L
Sbjct: 878 KEMLSNL 884
Score = 57.4 bits (137), Expect = 7e-12
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 14/277 (5%)
Query: 9 LRTSKFKAHTEPFMRRFFQRLLLPVAVMVVTQTSFVSAESIRLVGPDGQVQPTPQYSENI 68
LR + + +EP M +F +++ P ++ + + D QP P +
Sbjct: 95 LRVTSSQPLSEP-MVKFLVQVMWPNGRLLRDYSVLLDPSKFSPQTADAAAQPAPSQTITA 153
Query: 69 VRNSANNEPGRFFGPTSANQTLWSIASQLRPSSSVTVQQTLLAIYQLNPQAFENQNIHTL 128
A + R T+ TLW IA++ R SV QQT+LAI LNP AF + NI+ L
Sbjct: 154 PTTGATH---RNQYTTTPRDTLWEIAAKARNGGSV--QQTMLAIQALNPNAFIDGNINRL 208
Query: 129 IPGSTLRVPSLAQISRNSTQDAVNIMASHQAKLNQTPDTPVRPVAPPRPAPVAT---PKV 185
G LR+P Q + A+ +A+ Q +P +
Sbjct: 209 KTGQVLRLPDPVQSTALPQSAAIAEVAAQNEAWRQGRRYAAKPGTGQQQLDATNRGRGNT 268
Query: 186 EAVAQTPPQVTPTTAPQEKAPTELKTPAKPSQSTDAEVMALEEKNHTLRLMLSQVQSEVS 245
A T ++ +A E A K PA +++ ++ +E T R +++S ++
Sbjct: 269 GTAANTQDNLSLVSA--ESAKPGAKGPAGDAKALSNKLAITQENLDTTRRDNEELKSRMA 326
Query: 246 TLKEELGDENRIRSEVERLLEEERRKAEEASRLAPSA 282
L+ +L ++++ +E + + + + AP A
Sbjct: 327 DLQSQL---DKLQKLIELKNNQLAKMQADGAGAAPGA 360
Score = 50.8 bits (120), Expect = 7e-10
Identities = 78/353 (22%), Positives = 131/353 (37%), Gaps = 55/353 (15%)
Query: 166 DTPVRPVAPPRPAPVATPKVEAVAQTPPQVTPTTAPQEKAPTELKTPAKPSQSTDA---- 221
+TP P P PAPV TP V A P V P + + ++ + A
Sbjct: 502 NTPA-PAPAPTPAPVVTPVVMAAPIAAPLVAPAGERSDDVLDKAQSHINAGRLNQAAALL 560
Query: 222 -EVMALEEKNHTLRLMLSQVQSEVSTLKEELGDENRIRSEVERLLEEERRKAEEASRLAP 280
E ++LE + LRL L +V + + E ++ + + + E K SR
Sbjct: 561 EEGVSLEPERSDLRLKLMEVYGQQGDRDAFVAQERQLVANGDNFAKVEALK----SRFPA 616
Query: 281 SALDNLLSNGWLVALLALIPGLLIAIVVLLLLNRRSSAQQENPTQNNITSEMPTAAPVTL 340
A+ ++ G L A A + L A V LL Q E ++ TA ++L
Sbjct: 617 MAV---VAAGGLAA--AAVAAELDAQYVKELL------QDEPQAPETAADDLDTAFDLSL 665
Query: 341 GP-------EQTEDIGDDLLLDDDLFSTTDDKEENDAEKAFSDEDDVFADLNETDLDFNL 393
+ + + ++ D F DD + ++ D DL++ DLD +L
Sbjct: 666 DDLDNITPVDPAPAVEPEAPVELDAFPAEDDLSFASVLQEQTEMKDNLDDLSDFDLDMDL 725
Query: 394 DGQDS------DDLFVGID-------------------DDGDLDTEFD--ALNESANGIS 426
+ S DD + +D DD +L +FD +E + +
Sbjct: 726 GAEPSPATLAEDDFLLDLDDGVKDLPPVETPVVADVPQDDLELPADFDLSLADEMDSNPA 785
Query: 427 VNADDKALGLEEMERALNDVSEPTDNDDLNSFDLADENQMSEDDIEALLSGDE 479
D A L+++ L+ +S+ D A + + EDD + L DE
Sbjct: 786 AEPDAFAAELDDVNAELDRLSQSMAEPSFTEADAAMGDDLGEDDFDFLAGTDE 838
Score = 48.9 bits (115), Expect = 3e-09
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 879 LAEVTPSSAFDEQQVETEIEPESEPLAAEASNDESDLTALNELDLPEYTEEDVLADVQLE 938
LA ++ D Q V+ ++ EP A E + D+ D LD + D + V
Sbjct: 625 LAAAAVAAELDAQYVKELLQ--DEPQAPETAADDLDTAFDLSLD-----DLDNITPVDPA 677
Query: 939 PAAESEVEPDLELVNEPVTEEAFTELDELDLPEYTEEDALADAQLEPVAESEVEPELDLA 998
PA E E PV +AF D+L +E L+ +++ +++ +DL
Sbjct: 678 PAVEPEA---------PVELDAFPAEDDLSFASVLQEQTEMKDNLDDLSDFDLD--MDLG 726
Query: 999 SEPAEEEAFTELNKLDLPEYTEEDALADAQ-LESATESEV-ESELELVSEPAAEEAFTEL 1056
+EP+ + LDL +D + D +E+ ++V + +LEL A+ +
Sbjct: 727 AEPSPATLAEDDFLLDL-----DDGVKDLPPVETPVVADVPQDDLEL----PADFDLSLA 777
Query: 1057 DELDLPEYTEEDALADSQLEPAAESEVEPELELVSEPVTEEAFTELDELDLPEYTEED 1114
DE+D E DA A A +V EL+ +S+ + E +FTE D + E+D
Sbjct: 778 DEMDSNPAAEPDAFA------AELDDVNAELDRLSQSMAEPSFTEADAAMGDDLGEDD 829
Score = 41.2 bits (95), Expect = 5e-07
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 796 DSSPTLEGNAELELSS--AEDDLPEQTTATNETADELLADLAAQPQSNTVDTSDDALAPD 853
D +P +E A +EL + AEDDL + +T + + N D SD L
Sbjct: 675 DPAPAVEPEAPVELDAFPAEDDLSFASVLQEQT----------EMKDNLDDLSDFDL--- 721
Query: 854 GLSQSVEEPLTLNDLELPEENDEPQLAEVTPSSAFDEQQVETEIEPESEPLAAEASNDES 913
D++L E LAE D ++ P P+ A+ D+
Sbjct: 722 -------------DMDLGAEPSPATLAE--DDFLLDLDDGVKDLPPVETPVVADVPQDDL 766
Query: 914 DLTALNELDLPEYTEEDVLADVQLEPAAESEVEPDLELVNEPVTEEAFTELDELDLPEYT 973
+L A +L L + + + A+ A +V +L+ +++ + E +FTE D +
Sbjct: 767 ELPADFDLSLADEMDSNPAAEPDAFAAELDDVNAELDRLSQSMAEPSFTEADAAMGDDLG 826
Query: 974 EED 976
E+D
Sbjct: 827 EDD 829
Score = 38.5 bits (88), Expect = 3e-06
Identities = 97/397 (24%), Positives = 163/397 (41%), Gaps = 77/397 (19%)
Query: 805 AELELSSAEDDLPEQTTATNETADELLADLAAQPQSNT-----VDTSDDALAPDGLSQSV 859
AE + SAE DLPE + + ET AA + NT T + P ++ +
Sbjct: 473 AEEQEFSAEQDLPESSFSGLETP-------AASVKLNTPAPAPAPTPAPVVTPVVMAAPI 525
Query: 860 EEPLTL-----NDLELPEENDEPQLAEVTPSSAFDEQQVETEIEPESEPL---AAEASND 911
PL +D L + + ++A E+ V +EPE L E
Sbjct: 526 AAPLVAPAGERSDDVLDKAQSHINAGRLNQAAALLEEGV--SLEPERSDLRLKLMEVYGQ 583
Query: 912 ESDLTALNELDLPEYTEEDVLADVQL---------------EPAAESEVEPDLELVNEPV 956
+ D A + D A V+ AA E D + V E +
Sbjct: 584 QGDRDAFVAQERQLVANGDNFAKVEALKSRFPAMAVVAAGGLAAAAVAAELDAQYVKELL 643
Query: 957 TEE---AFTELDELDLP-EYTEEDALADAQLEPVAESEVEPELDLASEPAEEE-AFTELN 1011
+E T D+LD + + +D ++P E E ++L + PAE++ +F +
Sbjct: 644 QDEPQAPETAADDLDTAFDLSLDDLDNITPVDPAPAVEPEAPVELDAFPAEDDLSFASV- 702
Query: 1012 KLDLPEYTE-EDALADAQLESATESEVESELELVSEP-----AAEEAFTELDE--LDLPE 1063
L E TE +D L D S+ + +++L +EP A ++ +LD+ DLP
Sbjct: 703 ---LQEQTEMKDNLDDL-------SDFDLDMDLGAEPSPATLAEDDFLLDLDDGVKDLPP 752
Query: 1064 YTEEDALAD---SQLEPAAESEVEPELELVSEPVTE-EAF-TELDELDLPEYTEEDALAD 1118
E +AD LE A+ ++ E+ S P E +AF ELD+++ E D L+
Sbjct: 753 -VETPVVADVPQDDLELPADFDLSLADEMDSNPAAEPDAFAAELDDVN----AELDRLSQ 807
Query: 1119 AQLEPA-VESEVEPELELASEPAE-----EEASTELN 1149
+ EP+ E++ +L + + +EA+T+L+
Sbjct: 808 SMAEPSFTEADAAMGDDLGEDDFDFLAGTDEAATKLD 844