Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., glutamate--tRNA ligase from Pseudomonas simiae WCS417

 Score =  714 bits (1843), Expect = 0.0
 Identities = 343/551 (62%), Positives = 424/551 (76%), Gaps = 5/551 (0%)

Query: 6   ARPSNFIRQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLR 65
           A P NF+R II  DL  GKHT + TRFPPEPNGYLHIGHAKSIC+NFG+AQ++ G  +LR
Sbjct: 17  AVPVNFLRPIIQADLDSGKHTQIVTRFPPEPNGYLHIGHAKSICVNFGLAQEFGGVTHLR 76

Query: 66  FDDTNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDEL 125
           FDDTNP KE+ EY+++I+ D+ WLGF+WSGEV Y+S YFD+L+++A+ELI+ G AYVD+L
Sbjct: 77  FDDTNPAKEDQEYIDAIESDIKWLGFEWSGEVRYASKYFDQLFDWAVELIKAGKAYVDDL 136

Query: 126 TPEQIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIV 185
           TPEQ +EYRGTLTEPGK+SP+RDRSVEENL  F +MRAGEF +G   LRAKIDMAS  + 
Sbjct: 137 TPEQAKEYRGTLTEPGKNSPFRDRSVEENLDWFARMRAGEFPDGARVLRAKIDMASPNMN 196

Query: 186 MRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVL 245
           +RDP++YR+R A HHQTGDKWCIYP YDFTH  SDA+EGITHSICTLEF+ +R LY+W L
Sbjct: 197 LRDPIMYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTLEFESHRPLYEWFL 256

Query: 246 DNITIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPS 305
           D++ +P HPRQYEFSRLNL YT+ SKRKL QLV EK V GWDDPRM T+SG RRRG+TP+
Sbjct: 257 DSLPVPAHPRQYEFSRLNLNYTITSKRKLKQLVDEKHVHGWDDPRMSTLSGFRRRGYTPA 316

Query: 306 AIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETL 365
           +IR FC  +G  + + ++++  LE  IR DL+ NAPRAM VL P+K+VI N+    V+ L
Sbjct: 317 SIRNFCDMVGTNRSDGVVDFGMLEFSIRQDLDANAPRAMCVLRPLKVVITNYPEDKVDHL 376

Query: 366 TLANHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIKAERIE 425
            L  HP K E+G R++PF RE++I+R+DF EE  K YKRL    EVRLRG+YVI+A+   
Sbjct: 377 ELPRHPQKEELGVRKLPFAREIYIDRDDFMEEPPKGYKRLEPNGEVRLRGSYVIRADEAI 436

Query: 426 KDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFTVPNPGA 485
           KD  GNI  + CSYDP+TLGKNP +GRKVKGVIHWV A   +  E RLY+RLF  PNP  
Sbjct: 437 KDADGNIVELRCSYDPDTLGKNP-EGRKVKGVIHWVPAAASIECEVRLYDRLFRSPNPEK 495

Query: 486 AD---NFAETINPESLVKVQG-YVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALVFN 541
           A+   +F + INP+SL  + G   EPSL +A+PE  +QFER GYFCAD KDS P   VFN
Sbjct: 496 AEDSASFLDNINPDSLQVLTGCRAEPSLADAQPEDRFQFEREGYFCADIKDSKPGQPVFN 555

Query: 542 RTVGLRDSFAK 552
           RTV LRDS+ +
Sbjct: 556 RTVTLRDSWGQ 566