Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., glutamine--tRNA ligase/YqeY domain fusion protein from Phocaeicola dorei CL03T12C01

 Score =  597 bits (1540), Expect = e-175
 Identities = 298/571 (52%), Positives = 392/571 (68%), Gaps = 22/571 (3%)

Query: 5   EARPSNFIRQIIDKDLADGKHT-TVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCN 63
           E +  NFI Q ++ DL +GK+   V TRFPPEPNGYLHIGHAK+ICL+FGIA  Y G CN
Sbjct: 11  EKKSLNFIEQAVENDLKEGKNGGKVQTRFPPEPNGYLHIGHAKAICLDFGIAARYGGVCN 70

Query: 64  LRFDDTNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVD 123
           LRFDDTNP KE++EYVE+IK+D+ WLGF W  E  Y+SDYF +L+++A+ LI++G AY+D
Sbjct: 71  LRFDDTNPTKEDMEYVEAIKEDIQWLGFQWGNEY-YASDYFQQLWDFAVNLIKEGKAYID 129

Query: 124 ELTPEQIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSF 183
           E   EQI   +GT T+PG  SPYR+R +EE+L LF KM +GE  EG+  LRAKIDMAS  
Sbjct: 130 EQNSEQIAAQKGTPTQPGTESPYRNRPIEESLELFNKMNSGEIEEGKMVLRAKIDMASPN 189

Query: 184 IVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYD- 242
           +  RDP++YRV    HH+TG+ W  YPMYDF H  SD  EG+THS+CTLEF  +R LYD 
Sbjct: 190 MHFRDPIIYRVVKTPHHRTGETWKAYPMYDFAHGQSDYFEGVTHSLCTLEFVPHRPLYDL 249

Query: 243 ---WVLDNITIPCH-PRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLR 298
              WV +   +  + P QYEF++LNL YT+MSKR L  LV E LV GWDDPRMPT+ G R
Sbjct: 250 FVDWVKEGKDLDDNRPHQYEFNKLNLNYTLMSKRNLLILVKEHLVNGWDDPRMPTLCGFR 309

Query: 299 RRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFA 358
           RRG++P +IR+F  +IG T  + + +++ LES +R+DLN  A R  AV++PVKL+I N+ 
Sbjct: 310 RRGYSPESIRKFVDKIGYTTYDALNDFALLESAVREDLNSRATRVSAVINPVKLIITNYP 369

Query: 359 AGTVETLTLANHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYV 418
            G VE +   N+P  P  G   + F+RELWIER+DF E+A KKY R+  G+EVRL+  Y+
Sbjct: 370 EGQVEEMEAVNNPEDPSAGTHTIEFSRELWIERDDFMEDAPKKYFRMTPGQEVRLKSGYI 429

Query: 419 IKAERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLF 478
           +K    +KD+ GN+  ++C YDP++    P   RK+KG IHWVS    +PAE RLY+RL+
Sbjct: 430 VKCTGCKKDDNGNVVEVYCEYDPDSKTGMPGSNRKIKGTIHWVSCAHCLPAEVRLYDRLW 489

Query: 479 TVPNP-------------GAADNFAETINPESL-VKVQGYVEPSLVEAKPEFGYQFERMG 524
            V NP              A +   E INP+SL V    YVE  L +AKP    QF+R+G
Sbjct: 490 KVENPRDEMAAIREAKNCDALEAMKEMINPDSLNVLTNCYVEKYLADAKPLDYLQFQRIG 549

Query: 525 YFCADNKDSSPQALVFNRTVGLRDSFAKIDE 555
           YF  D KDS+P+ LVFNRTV L+D+++KI++
Sbjct: 550 YFNVD-KDSTPENLVFNRTVSLKDTWSKINK 579