Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

 Score =  318 bits (814), Expect = 4e-91
 Identities = 193/518 (37%), Positives = 275/518 (53%), Gaps = 64/518 (12%)

Query: 2   NILGYAQKLGKALMLPIATLPVAALLLRLGQPDLLGIP-----FMAAAGDAIFSQLPLLF 56
           N     QK+GKALMLP++ LPVA +LL +G  +   +P      M  AG ++F Q+PLLF
Sbjct: 28  NAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMPLLF 87

Query: 57  GLGIAIGLSKDGSGAAGLAGAVAYFVLSATAKTID-----ASINMSFFGGIFAGIIAGHS 111
            +G+A+G + +  G +GL+  V Y ++ AT K +      + I+    GGI AG +A  S
Sbjct: 88  AVGVALGFTNN-DGVSGLSAIVGYGIMVATLKVMATVMGVSGIDTGVLGGILAGGVAAWS 146

Query: 112 YNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHAVSTSGA 171
           +N F+  +LPE+L FFAGKR VPI+ G  ++  G +   IWP I   +   +   +    
Sbjct: 147 FNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAANQDP 206

Query: 172 LGQF-VYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLCVDPA 230
           +  F +YG + R+LIP GLHH+ N  F++  GTC          AG+ +  +        
Sbjct: 207 VTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTC-------VNGAGETVNGI-------- 251

Query: 231 LAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGFFPVM 290
                                        +T  + + D  R  G     G    G+    
Sbjct: 252 -----------------------------MTCFLTADDASRAAGN--GFGQLAGGYL-FK 279

Query: 291 MFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAMHAV 350
           MFGLP AA A+   A  E R +V G + S A  SFLTGITEP+EF F+F+AP LYA+HAV
Sbjct: 280 MFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAV 339

Query: 351 FTGLSLVVANMFGTLHGFGFSAGLIDFLLNWGLATKPATLFVIGLAFFALYFFTFTFAIR 410
             GL+ V+ N  G +HG  FS G IDF++    A     L  +G+ +  LY+  FTF IR
Sbjct: 340 LAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNMLLLVGLGIGYAVLYYVVFTFVIR 399

Query: 411 AFNLKSPGREDEEVETETDSADASKGDLARQYLKALGGHENLTSIDACITRLRLTLKDRS 470
           A NLK+PGREDE  +    S +   GDL    + A GG  N+T++DACITRLR+++ D +
Sbjct: 400 ALNLKTPGREDESADKSASSGNELAGDL----VAAFGGKANITNLDACITRLRVSVADTA 455

Query: 471 VADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEM 508
           + D+  LKKLGA GVV +    +Q I G  ++ +  EM
Sbjct: 456 LVDQDKLKKLGAAGVVMV-SGGVQAIFGTKSDNLKTEM 492