Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., PTS system, N-acetylglucosamine-specific IIC component / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.193) / PTS system, inactive IIB catalytic domain from Sphingobium sp. HT1-2

 Score =  277 bits (708), Expect = 8e-79
 Identities = 139/246 (56%), Positives = 180/246 (73%), Gaps = 4/246 (1%)

Query: 266 SGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSF 325
           +GD+ RFF GD +AG FM+GFFPVMMFGLP A LAMY  A  +RR +VGG L S+A  SF
Sbjct: 230 TGDIKRFFAGDPTAGGFMSGFFPVMMFGLPAACLAMYRTALPDRRKRVGGLLLSLALTSF 289

Query: 326 LTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNWGLAT 385
           LTG+TEP+EF F+FLAP LY +HAV TGLS+VV +  G   GFGFSAGL D+L+N+GLAT
Sbjct: 290 LTGVTEPIEFSFIFLAPILYVVHAVLTGLSMVVMDALGVKLGFGFSAGLFDYLMNYGLAT 349

Query: 386 KPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGREDE-EVETETDSADASKGDLARQYLK 444
           KP  L  +G+ +FA+Y+ TF++ IR FNLK+PGREDE     E  S   ++G      + 
Sbjct: 350 KPLMLIPVGIVYFAVYYATFSWCIRRFNLKTPGREDEPAAAAEMPSVAGARGP---AMVA 406

Query: 445 ALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIV 504
           ALGG  N+ S+DAC TRLRL L D ++ADEA L+ LGA+GVV+L +   QV+LGP+A+ V
Sbjct: 407 ALGGKANVRSVDACTTRLRLVLGDSTIADEARLRALGARGVVRLRDGGFQVVLGPIADQV 466

Query: 505 AGEMKA 510
           A E+++
Sbjct: 467 AAEIRS 472



 Score =  204 bits (518), Expect = 9e-57
 Identities = 108/217 (49%), Positives = 141/217 (64%), Gaps = 17/217 (7%)

Query: 3   ILGYAQKLGKALMLPIATLPVAALLLRLGQPDLLGIPFMAAAGDAIFSQLPLLFGLGIAI 62
           +L   Q LG+ALMLPIA LP+AALLLRLGQPD+L IPF+AAAGDAIFS L LLF  G+A+
Sbjct: 8   LLARLQPLGRALMLPIAVLPIAALLLRLGQPDMLAIPFVAAAGDAIFSNLGLLFAAGVAV 67

Query: 63  GLSKDGSGAAGLAGAVAYFVLSATAKTI-----------------DASINMSFFGGIFAG 105
           GL+++  GAA LAG +AY V +  AK +                      +S   GI +G
Sbjct: 68  GLARENHGAASLAGVIAYLVTTEGAKVLLVLPPDVAEAAQAAWRAKEIAKVSVPAGILSG 127

Query: 106 IIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHA 165
           I+AG  YN F   +LP++LAFFAG+R VPI+AGL  L    + G+ +P I+ G+D L+  
Sbjct: 128 IVAGLLYNRFSDIKLPDYLAFFAGRRFVPIVAGLAGLFGALMFGLGFPWIEAGIDRLSQW 187

Query: 166 VSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWFGMG 202
           V  +G LG FVYG LNR L+  GLHH++N+  WF +G
Sbjct: 188 VVAAGPLGLFVYGLLNRLLLITGLHHIINNVAWFLLG 224