Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., PTS transporter subunit EIIC from Pantoea agglomerans CFBP13505 P0401

 Score =  242 bits (617), Expect = 3e-68
 Identities = 177/558 (31%), Positives = 261/558 (46%), Gaps = 106/558 (18%)

Query: 11  GKALMLPIATLPVAALLLRLG----------------QPDLLGIPFMAAAGDAIFSQLPL 54
           GKALM+PI+ +  A + L L                 Q   L I F+     A+F+ LP+
Sbjct: 12  GKALMMPISVIAAAGIFLGLAAAMQNPAVTGDAFAQMQVPQLIIGFIRKVAGALFANLPV 71

Query: 55  LFGLGIAIGLSKDGSGAAGLAGAVAYFVL----SAT--AKTIDASI-------------- 94
            F +  AIGL+K     A  A  + Y V+    SAT  AK I A+               
Sbjct: 72  FFAVASAIGLAKAEKPTAAFAAVIGYIVMNVGISATLAAKGITAATTTPAALQQAGMDQT 131

Query: 95  ------------------NMSFFGGIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIM 136
                             NMS  GG+ AG+I    +N F+T +LP  ++FF G+R VPI+
Sbjct: 132 TAMMTSAEYINMLGVFTYNMSVLGGVIAGLITVALHNRFYTQQLPTAISFFGGRRFVPIV 191

Query: 137 AGLFALVAGALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSY 196
             +   + G L  +IWP+I  G+  +   +  SG  G F+ G   R LIP GLHH+LN  
Sbjct: 192 TVVCLPLIGVLLALIWPTIGDGIAWIGQMIGKSGQYGAFLLGAFERILIPTGLHHILNE- 250

Query: 197 FWFGMGTCQEILVSG-AQAAGQALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITA 255
                 T +   + G A   GQ                  VVG  + F   NA      +
Sbjct: 251 ------TVRFTPIGGMAVVDGQT-----------------VVGALNIF---NASLTHPGS 284

Query: 256 VVKEVTEVVKSGDLHRFFGGDKSAGVFM-NGFFPVMMFGLPGAALAMYLAAPAERRHQVG 314
           +  E                 ++A  F+  G  PVMMFGLP AALA+Y  A  E + +V 
Sbjct: 285 IPDETL---------------RTATQFLAQGKIPVMMFGLPAAALAIYHTARPEHKQRVK 329

Query: 315 GALFSVAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGL 374
             + + A  SF TGITEPLEF F+F++P LY +HA  TGLS ++ +M   + G     G+
Sbjct: 330 ALVMAGALTSFTTGITEPLEFCFIFVSPVLYLLHAFLTGLSFMLMSMLHLMIG-NVQGGV 388

Query: 375 ID---FLLNWGLATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGREDEEVETETDSA 431
           ID   F +  G  T       +G+ +  +Y++ F   I   N+++PGRE E+ + +  +A
Sbjct: 389 IDLVVFGMLGGAKTHWWWTLALGVIYAPIYYYAFRLVITRMNVETPGRESEDEKPQQVAA 448

Query: 432 DASKGDLARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGEN 491
           D    +  +  +  LGG  N+  +D C TRLR+ +K+ +   +  L   GA GV ++ E+
Sbjct: 449 D----ERTQVIISGLGGQANIEDVDCCFTRLRVRVKEMNQVVDQTLMSTGANGVNRVSEH 504

Query: 492 NLQVILGPLAEIVAGEMK 509
           ++QVI GP  E +A E+K
Sbjct: 505 DIQVIYGPQVEKIANEVK 522