Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  462 bits (1188), Expect = e-134
 Identities = 249/518 (48%), Positives = 325/518 (62%), Gaps = 60/518 (11%)

Query: 1   MNILGYAQKLGKALMLPIATLPVAALLLRLGQPDLLGIPFMAAAGDAIFSQLPLLFGLGI 60
           MNILG+ Q+LG+AL LPIA LPVAALLLR GQPDLL +PF+A AG +IF  L L+F +G+
Sbjct: 1   MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNMPFIAQAGGSIFDNLALVFAIGV 60

Query: 61  AIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASINMSFFGGIFAGIIAGHSYNAFHTTRL 120
           A   SKD +GAA LAGAV YFV++    TI+  INM    GI  G++ G  YN +   +L
Sbjct: 61  ASSWSKDSAGAAALAGAVGYFVMTKAMVTINPEINMGVLAGIITGLVGGAVYNRWSGIKL 120

Query: 121 PEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTL 180
           P++L+FF GKR VPI  G F LV  A+ G +WP +Q G+ A    + ++GALG  ++G +
Sbjct: 121 PDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHGIHAGGEWIVSAGALGSGIFGFI 180

Query: 181 NRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLCVDPALAKTLVVGQE 240
           NR LIP GLH VLN+  WF +G                                      
Sbjct: 181 NRLLIPTGLHQVLNTIAWFQIGE------------------------------------- 203

Query: 241 HTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALA 300
               F NA               V  GD++RF+ GD +AG+FM+GFFP+MMFGLPGAALA
Sbjct: 204 ----FTNAAG------------TVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALA 247

Query: 301 MYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVAN 360
           MY AAP ERR  VGG L SVA  +FLTG+TEPLEF+F+FLAP LY +HA+ TG+SL VA 
Sbjct: 248 MYFAAPKERRPMVGGMLLSVAITAFLTGVTEPLEFLFMFLAPLLYLLHAILTGISLFVAT 307

Query: 361 MFGTLHGFGFSAGLIDFLLNWGL---ATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSP 417
           + G   GF FSAG ID++L + L   +     L V+G+ FF +YF  F+  IR FNLK+P
Sbjct: 308 LLGIHAGFSFSAGAIDYVLMYNLPAASNNVWMLLVMGVVFFIIYFLLFSAVIRMFNLKTP 367

Query: 418 GRED--EEVETETDSADASKG--DLARQYLKALGGHENLTSIDACITRLRLTLKDRSVAD 473
           GRED  +E+ TE  +++  +G   LA  Y+ A+GG +NL +IDACITRLRLT+ D +  +
Sbjct: 368 GREDKVDEMVTEEANSNTEEGLTQLATSYIAAVGGTDNLKAIDACITRLRLTVNDSARVN 427

Query: 474 EAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEMKAI 511
           +A  K+LGA GVVKL +  +QVI+G  AE +  EMK +
Sbjct: 428 DAACKRLGASGVVKLNKQTIQVIVGAKAESIGDEMKKV 465