Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) from Escherichia coli BW25113

 Score =  304 bits (778), Expect = 5e-87
 Identities = 184/527 (34%), Positives = 275/527 (52%), Gaps = 80/527 (15%)

Query: 2   NILGYAQKLGKALMLPIATLPVAALLLRLGQPDLLGIP-----FMAAAGDAIFSQLPLLF 56
           N     QK+GK+LMLP++ LP+A +LL +G  +   +P      MA AG ++F+ +PL+F
Sbjct: 4   NAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIF 63

Query: 57  GLGIAIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASI--------------NMSFFGGI 102
            +G+A+G + +  G + LA  VAY ++  T   +   +              +    GGI
Sbjct: 64  AIGVALGFTNN-DGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGI 122

Query: 103 FAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDAL 162
            +G IA + +N F+  +LPE+L FFAGKR VPI++GL A+  G +   IWP I   +   
Sbjct: 123 ISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTF 182

Query: 163 AHAVSTSGALGQF-VYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPA 221
           +   +    +  F +YG + R L+P GLHH+ N  F   +G           AAGQ    
Sbjct: 183 SQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEY-------TNAAGQ---- 231

Query: 222 LEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGV 281
                                                     V  GD+ R+  GD +AG 
Sbjct: 232 ------------------------------------------VFHGDIPRYMAGDPTAGK 249

Query: 282 FMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLA 341
              GF    M+GLP AA+A++ +A  E R +VGG + S A  SFLTGITEP+EF F+F+A
Sbjct: 250 LSGGFL-FKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVA 308

Query: 342 PALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNWGLATKPATLFVIGLAFFALY 401
           P LY +HA+  GL+  +  + G   G  FS GLIDF++  G ++K     ++G+ +  +Y
Sbjct: 309 PILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVY 368

Query: 402 FFTFTFAIRAFNLKSPGREDEEVETETDSADASKGDLARQYLKALGGHENLTSIDACITR 461
           +  F   I+A +LK+PGRED       D+      ++A   + A GG EN+T++DACITR
Sbjct: 369 YTIFRVLIKALDLKTPGRED----ATEDAKATGTSEMAPALVAAFGGKENITNLDACITR 424

Query: 462 LRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEM 508
           LR+++ D S  D+A LKKLGA GVV  G + +Q I G  ++ +  EM
Sbjct: 425 LRVSVADVSKVDQAGLKKLGAAGVVVAG-SGVQAIFGTKSDNLKTEM 470