Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., PTS system, glucose-like IIB component from Enterobacter asburiae PDN3

 Score =  315 bits (807), Expect = 2e-90
 Identities = 202/534 (37%), Positives = 276/534 (51%), Gaps = 80/534 (14%)

Query: 10  LGKALMLPIATLPVAALLLRLGQPDLLGIPFMAAAGDAIFSQLPLLFGLGIAIGLSKDGS 69
           +G+ALMLPI+ LP A LLL  G  D   +P M  AG  IF  LP+LF +G A+GL+ + S
Sbjct: 17  IGRALMLPISLLPAAGLLLAFG--DKFHLPLMMNAGGVIFDNLPMLFAIGSAVGLASE-S 73

Query: 70  GAAGLAGAVAYFVLSATAKTIDA-------------------SINMSFFGGIFAGIIAGH 110
           G A L+ AV+ FV + T  T+ +                   ++ M  FGG+  GI+A  
Sbjct: 74  GIAALSAAVSVFVTNITISTVLSITPEMASQGGKYAMVVGIPTLQMGVFGGLICGILAAW 133

Query: 111 SYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHAVSTSG 170
            YN FHT +LPE+L FF+GKR V I     + + G L   +W  IQ G+DAL+  V+   
Sbjct: 134 CYNRFHTMQLPEFLGFFSGKRFVAIATAFLSFLMGLLLPYVWQHIQAGIDALSVVVNGDN 193

Query: 171 -ALGQFVYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLCVDP 229
            A   F++G + RALIP+GLHH+    FW+  G            AGQ            
Sbjct: 194 QAASTFIFGLVERALIPLGLHHIWYPSFWYSFGDY-------TTQAGQ------------ 234

Query: 230 ALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGD--KSAGVFMNGFF 287
                 V+  + T  FK             + E VKS      F  D  ++AG FM G F
Sbjct: 235 ------VIHGDQTIWFKM------------LEEGVKS------FSSDTYQNAGKFMQGEF 270

Query: 288 PVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAM 347
           P+M+F LP A LAMY  A  + +    G LFS A   FLTGITEP+EF F+F+AP LY  
Sbjct: 271 PLMLFALPAACLAMYHEAHTKNKKIAAGILFSAALTCFLTGITEPVEFTFIFVAPILYVF 330

Query: 348 HAVFTGLSLVVANMFGTLHGFGFSAGLIDFL-------LNWGLATKPATLFVIGLAFFAL 400
           +A+  GL+ +   +        FSAG ID+L        N G  T      +IG+    +
Sbjct: 331 NAIMAGLAYMTMYLLHAHIAKSFSAGFIDYLSFGILPSFN-GYKTNFLNAIIIGIPMGLI 389

Query: 401 YFFTFTFAIRAFNLKSPGREDEEVETETDSADASKGDLARQYLKALGGHENLTSIDACIT 460
           Y+FTF F IR F++K+PGR     E   ++ D S  +LA + +  LGG  N+ S+ ACIT
Sbjct: 390 YYFTFRFVIRRFDVKTPGR----TEVTANADDKSDSELATEIITLLGGAHNIDSVGACIT 445

Query: 461 RLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEMKAISPK 514
           RLRL +    V D+  L  LGA+GVV +G+N +QVI G  A+ +A  M  +  K
Sbjct: 446 RLRLEVAKSEVVDKDGLNGLGARGVVFVGDNGIQVIFGARAQFIAQTMSTMIGK 499