Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., PTS system, N-acetylglucosamine-specific IIBC component from Enterobacter asburiae PDN3

 Score =  332 bits (851), Expect = 3e-95
 Identities = 213/536 (39%), Positives = 286/536 (53%), Gaps = 93/536 (17%)

Query: 15  MLPIATLPVAALLLRLG---QPDLLG-----IPFMAAAGDAIFSQLPLLFGLGIAIGLSK 66
           M+P+ATLP AA+L+ +G    P+  G       F   +G AI   + +LF +G+A G+SK
Sbjct: 1   MVPVATLPAAAILMGVGYWIDPNGWGNTSALAAFFIKSGSAIIDNMSVLFAIGVAYGMSK 60

Query: 67  DGSGAAGLAGAVAYFVLS--------ATAKTIDASINMSFFG-------GIFAGIIAGHS 111
           D  GAA L G V + VL+        A  + I A    + FG       GI  GII+   
Sbjct: 61  DKDGAAALTGFVGFLVLTTLCSPAAVAMIQKIPADQVPAAFGKISNQFVGILVGIISAEL 120

Query: 112 YNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHAVSTSGA 171
           YN F +  LP+ L+FF+G+RLVPI+     +V   +   +WP I  GL      +   G+
Sbjct: 121 YNRFSSVELPKALSFFSGRRLVPILTSFVMIVVAFIMMYVWPMIFDGLVNFGEHIQKLGS 180

Query: 172 LGQFVYGTLNRALIPVGLHHVLNSYFWFGMGTCQEI--LVSGAQA--AGQALPALEKLCV 227
           +G  VY   NR LIPVGLHH LNS FWF +    +I   + GAQ+  AG+A         
Sbjct: 181 VGAGVYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQSIEAGKA--------- 231

Query: 228 DPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGFF 287
                   VVG                                    G   AG F     
Sbjct: 232 --------VVG----------------------------------ITGRYQAGFF----- 244

Query: 288 PVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAM 347
           P+MMFGLPGAALA+Y  A  E + +V G + + AF +F TGITEPLEF F+F+AP LY +
Sbjct: 245 PIMMFGLPGAALAIYHCARPENKAKVLGIMMAGAFAAFFTGITEPLEFSFMFVAPVLYVI 304

Query: 348 HAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNW--GLATKPATLFVIGLAFFALYFFTF 405
           HAV TG+S+ +A     + GFGFSAGL+D +L+    LAT    L   GL FFA+Y+  F
Sbjct: 305 HAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATHWWMLIPQGLVFFAIYYMVF 364

Query: 406 TFAIRAFNLKSPGREDEEVETETDSADAS--------KGDLARQYLKALGGHENLTSIDA 457
            F I  FNL +PGRE     +E D  D +           LARQY+ A+GG +NLT IDA
Sbjct: 365 RFTITKFNLMTPGRELAVAGSEADGQDVNVSGAQDQDVSGLARQYIAAVGGSDNLTGIDA 424

Query: 458 CITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEMKAISP 513
           CITRLRL +KD S+ +EA+ K+LGA GV++L + ++Q+I+G +AE +A  MK   P
Sbjct: 425 CITRLRLNVKDSSLVNEALAKRLGASGVIRLNKTSVQIIVGFVAEKIANAMKTTGP 480