Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., PTS system, glucose-like IIB component from Enterobacter asburiae PDN3

 Score =  242 bits (618), Expect = 2e-68
 Identities = 174/541 (32%), Positives = 253/541 (46%), Gaps = 99/541 (18%)

Query: 8   QKLGKALMLPIATLPVAALLLRLGQP----------DLLGIPFMAAAGD-------AIFS 50
           Q  GK+L  P+  LP+  L +  G              LG P +   G        ++  
Sbjct: 9   QNFGKSLYGPVLILPIVGLFIAFGNVLGNGNLAEYLPFLGHPLIQHTGQLIAKSAVSVLV 68

Query: 51  QLPLLFGLGIAIGLSKDGSGAAGLAGAVAYFV--------------------LSATAKTI 90
            L L+F +GI IGL+    G A L G V + V                    + A  +T+
Sbjct: 69  NLALVFAVGIPIGLATRDKGYAALIGLVTFVVFINAMNVTLQLQGALAPAAQMKAAGQTM 128

Query: 91  DASIN---MSFFGGIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGAL 147
              +    M  F GI  G ++G+ YN +   +    +A ++G   V I+    +++ G +
Sbjct: 129 VLGVQVLEMGVFAGILTGALSGYLYNKYSGVQFNGAMAIYSGHCFVAIVMLPVSMLLGVV 188

Query: 148 SGVIWPSIQGGLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWFG-MGTCQE 206
              +WP  Q G+ ALA A+  SG  G  +YG L R L+P GLHH++ + F +  +G  QE
Sbjct: 189 MSELWPFAQHGISALALAIKGSGPFGVAIYGFLERILVPTGLHHLVYTPFLYTELGGTQE 248

Query: 207 ILVSGAQAAGQALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKS 266
           +  +  Q A     A E  C D     + VV      +                      
Sbjct: 249 VCGATYQGARNIYFA-EMACPDVKQLSSTVVWDARGIS---------------------- 285

Query: 267 GDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFL 326
                                   MFGLP AALAMY+ A  ER+      L   A  S L
Sbjct: 286 -----------------------KMFGLPAAALAMYMTAKPERKAIAKAILIPAALTSLL 322

Query: 327 TGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLL-NWGLAT 385
            G+TEP+EF F+F+AP L+ +HAV TG+ +++ ++ G +H  G + G+IDF+L N  L T
Sbjct: 323 VGVTEPIEFSFLFVAPLLFVVHAVLTGIGMMLFSLLG-VHAIG-ANGIIDFILYNLPLGT 380

Query: 386 KPAT---LFVIGLAFFALYFFTFTFAIRAFNLKSPGREDEEVETETDSAD--ASKGD--- 437
           + +      V+GL  FALYF  F F I  FN+K+PGRED++ ET   S     +KG+   
Sbjct: 381 EKSNWPMYIVVGLIMFALYFVVFRFLILRFNMKTPGREDDDQETRLYSKQEYQAKGNNDW 440

Query: 438 LARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVIL 497
           L    +  LGG EN+  +D C TRLR+T+KD  + DE  LK  GAKG++K G NN+QV+ 
Sbjct: 441 LGESIVVGLGGRENIEVVDNCYTRLRVTVKDVDIIDEPRLKATGAKGIIKQG-NNVQVVY 499

Query: 498 G 498
           G
Sbjct: 500 G 500