Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., PTS maltose transporter subunit IICB from Escherichia coli ECRC101

 Score =  271 bits (694), Expect = 3e-77
 Identities = 188/558 (33%), Positives = 268/558 (48%), Gaps = 99/558 (17%)

Query: 6   YAQKLGKALMLPIATLPVAALLLRLGQP----------DLLGIP-------FMAAAGDAI 48
           + Q+LGK  MLP+A L    ++L +G             +LG P       +M+  G   
Sbjct: 14  FFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLLPVLGNPVLQAIFTWMSKIGSFA 73

Query: 49  FSQLPLLFGLGIAIGLSKDGSGAAGLAGAVAYFVLSATAK----------TIDA------ 92
           FS LP++F + I +GL+++  G A  AG V Y V++              T DA      
Sbjct: 74  FSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTNKGILPTTDAAVLKAN 133

Query: 93  ---------SINMSFFGGIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALV 143
                    SI+    G + AGII    +  FH  RLP+ LAFF G R VPI++ L   +
Sbjct: 134 NIQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGTRFVPIISSLVMGL 193

Query: 144 AGALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWF-GMG 202
            G +  ++WP    G+  L H ++++G  G  ++GT  R L+P GLHH+L +   F   G
Sbjct: 194 VGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAG 253

Query: 203 TCQEIL---VSGAQAAGQALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKE 259
             QE+    VSGA    QA                L     H F+             + 
Sbjct: 254 GTQEVCGQTVSGALTIFQA---------------QLSCPTTHGFS-------------ES 285

Query: 260 VTEVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFS 319
            T  +  G +  F GG                  LPGAALAMY  A  E RH++ G L S
Sbjct: 286 ATRFLSQGKMPAFLGG------------------LPGAALAMYHCARPENRHKIKGLLIS 327

Query: 320 VAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFL- 378
                 + G TEPLEF+F+F+AP LY +HA+ TGL   V ++ G   G      +IDF+ 
Sbjct: 328 GLIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIG-NTDGNIIDFVV 386

Query: 379 --LNWGLATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGREDE---EVETETDSADA 433
             +  GL+TK   + V+   +F +Y+  F FAI  FNLK+PGR+ E    +E     A  
Sbjct: 387 FGILHGLSTKWYMVPVVVAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPG 446

Query: 434 SKGDLARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNL 493
             G      L+ALGG +N+ S+D CITRLRL++KD S+ +   LK   A GVV+L ++NL
Sbjct: 447 KSGYNVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNL 506

Query: 494 QVILGPLAEIVAGEMKAI 511
           QV++GP  + V  EM  +
Sbjct: 507 QVVIGPQVQSVKDEMAGL 524