Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., PTS transporter subunit EIIC from Dickeya dianthicola ME23

 Score =  347 bits (891), Expect = e-100
 Identities = 207/540 (38%), Positives = 292/540 (54%), Gaps = 80/540 (14%)

Query: 1   MNILGYAQKLGKALMLPIATLPVAALLLRLGQ-PDLLG-------IPFMAAAGDAIFSQL 52
           M+ LGY QK+G+ALM+P+ATLP AA+L+ +G   D +G          +  +G AI   +
Sbjct: 1   MSTLGYLQKVGRALMVPVATLPAAAILMGVGYWIDPIGWGSESALAALLIKSGAAIIEHM 60

Query: 53  PLLFGLGIAIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASINMSF-------------- 98
            +LF +G+A G+SKD  GAA L+G V Y VL+        S+                  
Sbjct: 61  AVLFAVGVAYGMSKDKDGAAALSGFVGYLVLTTLCSPAAVSMIQHIPLAEVPKAFSKIEN 120

Query: 99  -FGGIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQG 157
            F GI  G+I+   YN +    LP+ L+FF G+RLVPI+  L  +V   +   +WP I  
Sbjct: 121 QFIGILVGVISAEIYNRYGQIELPKALSFFNGRRLVPILVSLLMIVVAFVLMYVWPVIYN 180

Query: 158 GLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQ 217
            L +    +   G+ G  +Y   NR LIPVGLHH LNS FWF +    +I          
Sbjct: 181 ALVSFGEHIQQMGSAGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDI---------- 230

Query: 218 ALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDK 277
                             + GQ+   A K    P IT                       
Sbjct: 231 ---------------PNFLSGQQAIDAGK--AIPGIT----------------------- 250

Query: 278 SAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMF 337
             G +  GFFP+MMFGLPGAALA+Y  A  E R +V G + + A  +F TGITEPLEF F
Sbjct: 251 --GRYQAGFFPIMMFGLPGAALAIYHCARPENRSRVAGIMVAAALAAFFTGITEPLEFSF 308

Query: 338 VFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNW--GLATKPATLFVIGL 395
           +F+AP LY +HAV TG+S+ +A     + GFGFSAGL+D +L+    LAT    L + G 
Sbjct: 309 MFVAPVLYVLHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSTRNPLATHWYMLLLQGA 368

Query: 396 AFFALYFFTFTFAIRAFNLKSPGREDEEVETETDSADASKGD---LARQYLKALGGHENL 452
            FF +Y+  F F I  FNL +PGRE    +T ++SA A  G+   +AR YL+A+GG +NL
Sbjct: 369 VFFVIYYGVFRFTITRFNLMTPGREAAVTQTVSESAPAPAGNSQSMARGYLQAIGGKDNL 428

Query: 453 TSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEMKAIS 512
           T IDACITRLRL++KD ++ DE+  + +GA GV++L + ++Q+++G  AE +A  ++ +S
Sbjct: 429 TGIDACITRLRLSVKDSNLVDESAARNVGAVGVIRLNKQSVQIVVGTQAENIAAALREVS 488