Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., cellobiose/arbutin/salicin-specific PTS enzymes, IIB and IC components from Escherichia coli BL21

 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 438 LARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKL-GAKGVVKLGENNLQVI 496
           LAR  + ALGG +N++++  C+TRLR  +KD ++ D   LK + G  GVV+  +N  QVI
Sbjct: 8   LARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTISGVLGVVR-SDNQCQVI 66

Query: 497 LGPLAEIVAGEMKAISP 513
           +G        E+ ++ P
Sbjct: 67  IGNTVSQAFQEVVSLLP 83



 Score = 24.6 bits (52), Expect = 0.008
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 10  LGKALMLPIATLPVAALLLRLGQPDLLGIPFMAAAGDAIFSQLPLLFGLGIAIGLSKDGS 69
           +G +++  +A +   + +L  G P L     +   GD  F  LPL+     AI    + S
Sbjct: 122 IGGSMVKLLAMILEMSGVLTKGSPTLT---ILNVIGDGAFFFLPLMVAASAAIKFKTNMS 178

Query: 70  GAAGLAGAVAY 80
            A  +AG + +
Sbjct: 179 LAIAIAGVLVH 189