Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Xylose-responsive transcription regulator, ROK family from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 1e-26
 Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 18/272 (6%)

Query: 6   IGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQ 65
           IG+  LVK++N + + RL+  Q  +SR ++A  S L  ++V+ + R+L++   + E    
Sbjct: 4   IGDQQLVKRMNRSVLLRLLRAQPGLSRARLAGESGLTKSTVSLLVRELIDEDWLSESGAA 63

Query: 66  ASTG-GRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
            + G GR +  L   V     + V I  + ++L    L G  L  +         D   +
Sbjct: 64  VADGLGRPSTPLRINVGVRALMGVEIAVETVRLVCMSLQGEVLYSDTQAL----ADSAPA 119

Query: 125 SLIKQIKQFIQQHTALIDQL----IAIGVALPGLVNPETGVVEYMPNVAINELPLGATIR 180
               Q+ +      A ++QL     +IGV +PG V+  TGVV + PN+    + L   + 
Sbjct: 120 GACAQVARMASVAQARLEQLGLRLSSIGVCVPGAVDDCTGVVRFAPNLGWRNVSLLPALE 179

Query: 181 DEF------HVECFVGNDVRGIALAEHYFGAS--QDCQDSIL-VSVHRGTGAGIIVNGQV 231
             F       V   + ND     L E+ F AS  Q+ +D ++ V+   G GAG+++N ++
Sbjct: 180 KAFGAVGLPRVTVQLQNDADAAVLGEYEFAASVGQEGEDPLIFVNCDVGVGAGVVLNDRL 239

Query: 232 FLGYNRNVGEIGHIQIDPLGEQCQCGNFGCLE 263
           F G     GEIGH  ++  G +C CG  GC E
Sbjct: 240 FTGAQGMAGEIGHTILELDGPECSCGRRGCAE 271