Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., ROK family protein from Variovorax sp. OAS795

 Score =  143 bits (361), Expect = 8e-39
 Identities = 109/381 (28%), Positives = 192/381 (50%), Gaps = 22/381 (5%)

Query: 31  SRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQASTGGRRAISLTTEVKPFHS-IAVR 89
           SR  +A+    + +    +   L+++GL+ E   Q S+GGRRA +L      FH+ + V 
Sbjct: 14  SRHAMAEQLGFSKSKANALIAGLVDQGLLAEAGLQRSSGGRRAENLQ-----FHAGLGVL 68

Query: 90  IGRDY--IQLSLYDLGGNSLVDEHHEFHYNTQD---VLMSSLIKQIKQFIQQHTALIDQL 144
           +G D     L +  +  +  V   HE   + ++   V+++ +   +++ + +  +   Q+
Sbjct: 69  VGIDIGATSLDVAVMRPDLTVLAQHEEPADVREGPAVVLARVRVLMRELLGRCQSGARQV 128

Query: 145 IAIGVALPGLVNPETGVVEYMPNV-AINELPLGATIRDEFHVECFVGNDVRGIALAEHYF 203
           + IG+ +PG VN E G +   P + A +   +   +R+++    FV NDV  +AL E  +
Sbjct: 129 LGIGIGVPGPVNFEIGQLVNPPLMPAWDSFSIRDYLREDYAAPVFVDNDVNLMALGE-LW 187

Query: 204 GASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQCQCGNFGCLE 263
              +   + +++ +  G G GI+ +G+V+ G   + G++GHI +D  G +C CGN GC+E
Sbjct: 188 RLKRSLNNFLVIKIGTGIGCGIVCHGEVYRGAAGSAGDVGHICVDQEGPRCHCGNVGCVE 247

Query: 264 TVATNPAITSRVQKLIAQGYESS-----LSTLDTITIDDVCEHANAGDELAKQALVRVGN 318
            +A  PAIT R+    A+  ES+     L     I   DV + + AGD  A   + R GN
Sbjct: 248 AMAAGPAIT-RMAVQAAEAGESAMLAECLRVHGRIDAVDVGQASRAGDTAANGIIQRAGN 306

Query: 319 QLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFHQHLPIVSSQVYK 378
            +G+ +A  VN FNP  + I G IT    +   A++++V  +SL    +HL I  + +  
Sbjct: 307 LIGQMLASVVNFFNPSHVFIGGGITRIGPLFLAAVRQSVYQRSLALSTRHLEIQYTPLGV 366

Query: 379 QPTM---GAFAMIKRAMLNGV 396
           Q  +   G  AM +   + GV
Sbjct: 367 QGGLIGAGVLAMHETLKVRGV 387