Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 27/280 (9%)

Query: 79  EVKPFHS-IAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVL--MSSLIKQIKQFIQ 135
           E K F+  I + IG   I++ + D  G+ L  +      N    +  + SLI   +Q  Q
Sbjct: 26  EQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQFVDCVCSLIVDAEQATQ 85

Query: 136 QHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFHVECFVGNDVRG 195
                   + +IG+ LPG V+P TG+++      +N   L + ++     E  + ND   
Sbjct: 86  P-------VDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANC 138

Query: 196 IALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIG-------HIQID 248
            AL+E   GA ++        +  G G  I+VN QV +G N   GE G       H++ D
Sbjct: 139 FALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQD 198

Query: 249 PLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANAGDEL 308
                C CG   C+E   +        Q L          T + IT  ++ +     +  
Sbjct: 199 GAARYCYCGRQNCIERFISGSGFQDSYQAL----------TGECITASEIMKRYKQQEPE 248

Query: 309 AKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEI 348
           A     ++ + + ++ A  VN+ +P  IV+ G ++   E+
Sbjct: 249 AIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDEL 288