Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., ROK family transcriptional regulator from Pectobacterium carotovorum WPP14

 Score =  292 bits (747), Expect = 1e-83
 Identities = 151/404 (37%), Positives = 247/404 (61%), Gaps = 8/404 (1%)

Query: 4   GQIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVA 63
           GQ G++D +KQ+N+ AVYRLID+ GPISRI+++  +QLAPAS+TKI R+LLE  L++E  
Sbjct: 5   GQPGHIDQIKQMNAGAVYRLIDKYGPISRIELSKRAQLAPASITKIVRELLEAHLVQETE 64

Query: 64  -QQASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVL 122
            Q   + GR AI L  + + +H ++ RI  + + L+L DL    +V+E       +   L
Sbjct: 65  YQDVGSRGRPAIGLILDTEAWHYLSARISHNTLLLALRDLSSKLVVEEEIPLPAASPQPL 124

Query: 123 MSSLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDE 182
           +  ++ +I QF  +H   +++L AI +  PG+++   G++  MP   + E+ +G  +   
Sbjct: 125 LDRILNEIDQFFIRHQKRLERLTAIAITAPGMIDASKGIIHRMPFYDVEEMAIGPALEQR 184

Query: 183 FHVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEI 242
             +  ++ +D+    +AE  +GAS+DCQ+ I V +    GAG+I  G++    +RN+ EI
Sbjct: 185 TGLPVYLQHDICAWTMAEALYGASRDCQNVIQVVIDHNVGAGVITGGRILHARSRNLVEI 244

Query: 243 GHIQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTL---DTITIDDVC 299
           GH Q+DP G++C CGN GCLETVA+    T  + +L  Q   +S+S+L     ++++++C
Sbjct: 245 GHTQVDPYGKRCYCGNHGCLETVAS----TENMLELAQQRMNTSMSSLLHGSPLSVENLC 300

Query: 300 EHANAGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVEN 359
           + A  GD+LAK  +  VG+ +G+ +AI VNLFNP KI++   +  A  I+ PAI   ++ 
Sbjct: 301 DAALKGDQLAKDIINDVGHNVGRIVAIMVNLFNPDKILVGSPLNKAASILHPAILGCIQQ 360

Query: 360 QSLKTFHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403
           QS   +  +L + ++Q Y Q TM   A++K A+ NG LL KLL+
Sbjct: 361 QSFPPYSHNLQVEATQFYNQGTMPGAALVKDALYNGSLLVKLLQ 404