Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  484 bits (1245), Expect = e-141
 Identities = 244/399 (61%), Positives = 300/399 (75%), Gaps = 1/399 (0%)

Query: 5   QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQ 64
           QIGNVDLVKQLNSAAVYRLIDQ GPISRIQ+A+ SQLAPASVTKITRQL+ERGLIKEV Q
Sbjct: 8   QIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQ 67

Query: 65  QASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
           QASTGGRRAIS+ TE + FH+I VR+GR    L+LYDL    + +EH+     TQ+ L  
Sbjct: 68  QASTGGRRAISIVTETRNFHAIGVRLGRHDTTLTLYDLSSKVVAEEHYPLPERTQETLEH 127

Query: 125 SLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFH 184
           +L+  I  FI      I +LIAI V LPGLV+PE+GV+ YMP++ +    L   +   FH
Sbjct: 128 ALLNTIAVFIDSCQRKIRELIAISVILPGLVDPESGVIRYMPHIQVENWGLVEALEKRFH 187

Query: 185 VECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGH 244
           V CFVG+D+R +ALAEHYFGASQDC+DSILV VHRGTGAGII NG++F+G N NVGEIGH
Sbjct: 188 VTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGH 247

Query: 245 IQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANA 304
           IQ++PLGE+C CGNFGCLET+A N AI  RV  L+ QGY+S +  LD  TI  +C+ AN 
Sbjct: 248 IQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRV-PLDDCTIKTICKAANR 306

Query: 305 GDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKT 364
           GD LA + +  VG  LGK IAI +NLFNPQKIVIAG+I  A +++ PAI+  +  Q+LK 
Sbjct: 307 GDSLASEVIEHVGRHLGKTIAIAINLFNPQKIVIAGEIIEADKVLLPAIESCINTQALKA 366

Query: 365 FHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403
           F ++LP+V S +  +  +GAFA++KRAMLNG LLQ LLE
Sbjct: 367 FRKNLPVVRSTLDHRSAIGAFALVKRAMLNGTLLQCLLE 405