Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., transcriptional regulator from Erwinia amylovora T8

 Score =  275 bits (702), Expect = 2e-78
 Identities = 149/401 (37%), Positives = 237/401 (59%), Gaps = 8/401 (1%)

Query: 7   GNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVA-QQ 65
           G++D +KQ+N+  VYRLID+ GP+SRI ++  + L+PAS+TKI R+LL+  L+KE    +
Sbjct: 8   GHIDHIKQMNAGIVYRLIDRYGPVSRIDLSKKASLSPASITKIVRELLQAHLVKETEFHE 67

Query: 66  ASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMSS 125
           A + GR A  L  + + +H ++VRIG   I ++L DL    + ++        ++ L++ 
Sbjct: 68  AGSRGRPATGLVLDSQAWHFLSVRIGHGEIDIALRDLSTQLVAEQQLPLPAVAEEPLLAR 127

Query: 126 LIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFHV 185
           +++ I++F   H   +++L AI   L G +N  TG+V+++P    + LPLG  +     +
Sbjct: 128 ILQHIERFFILHQHRLERLTAIAFTLSGSINSRTGIVQHLPFYQADNLPLGPEMEKRSGL 187

Query: 186 ECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHI 245
             F+ ND+     AE  FGAS+D  D I V + +  GA ++  GQ+  G    + EIGHI
Sbjct: 188 PVFIQNDICAWTRAESLFGASRDASDIIQVVIGQNVGAAVMTTGQLLHGGGNTMAEIGHI 247

Query: 246 QIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTL---DTITIDDVCEHA 302
           Q+DP G++C CGN GCLETVA        + KL AQ   +S  ++     +TID++C+ A
Sbjct: 248 QVDPCGQRCYCGNRGCLETVAG----IDNILKLAAQRLSASTGSVLHNQPLTIDNLCDAA 303

Query: 303 NAGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSL 362
             GD LA   +V VG+ LG+ +AI VNLF+PQKI+I   +  A+ I+FPAI   +  Q+L
Sbjct: 304 LHGDRLACDIIVGVGSSLGRILAIMVNLFHPQKILIGSPLNRARSILFPAIVGCIRQQAL 363

Query: 363 KTFHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403
            T    L +  ++  +  T+   A++K A+ NG LL +LL+
Sbjct: 364 PTLSAELSVEPTRWVQSGTLSGAALVKDALYNGSLLIRLLQ 404