Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., ROK family transcriptional regulator from Erwinia tracheiphila SCR3

 Score =  476 bits (1224), Expect = e-139
 Identities = 241/399 (60%), Positives = 301/399 (75%), Gaps = 1/399 (0%)

Query: 5   QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQ 64
           QIGN+DLVKQLNSAAVYRLIDQQGPISRIQ+A+ SQLAPASVTKITRQL+ERGLIKEV Q
Sbjct: 8   QIGNIDLVKQLNSAAVYRLIDQQGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVNQ 67

Query: 65  QASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
           QASTGGRRAIS+ TE + F++I VR+GR    L+L+DL G  L  E +     +Q  L +
Sbjct: 68  QASTGGRRAISIITETRGFNTIGVRLGRSDATLTLFDLSGKPLAQEDYSLPEESQQALEN 127

Query: 125 SLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFH 184
           +L   I  F + H   + +LIAI V LPGLV+P  GV+ YMP++ +N  PL A ++  F+
Sbjct: 128 ALFDAITDFSELHQRKLRELIAISVILPGLVDPNNGVIRYMPHIEVNHWPLVANLQKRFN 187

Query: 185 VECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGH 244
           V  FVG+D+R +ALAEHYFGAS+D  DSILV VHRGTGAGII NG+VFLG N NVGE+GH
Sbjct: 188 VSSFVGHDIRSLALAEHYFGASRDYADSILVRVHRGTGAGIITNGKVFLGSNGNVGELGH 247

Query: 245 IQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANA 304
           IQ+DPLGE+C CGNFGCLET+A N AI  RV  L+ QG+ SSL T +   I D+C+ AN 
Sbjct: 248 IQVDPLGERCHCGNFGCLETIAANTAIEKRVSNLLRQGHASSL-TQEACLITDICKAANH 306

Query: 305 GDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKT 364
           GD LA + +  VG  LGKA+AI +NLFNPQK+VIAG+IT A +I+  AI+  +  Q+LK+
Sbjct: 307 GDALATEVIDYVGRHLGKAVAIAINLFNPQKVVIAGEITEADKILLAAIEGCINTQTLKS 366

Query: 365 FHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403
           F  +LP+V S++  +  +GAFA+ KRAMLNG+LLQ LLE
Sbjct: 367 FRNNLPVVRSEIDHRSAIGAFALAKRAMLNGILLQHLLE 405