Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., ROK family protein from Erwinia tracheiphila SCR3

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 30/278 (10%)

Query: 101 DLGGN----SLVDEHHE----------FHYNTQDVLMSSLIKQIKQFIQQHTALIDQLIA 146
           D+GG     +L+ + HE          F    QD    +L+ +I   +   ++L     +
Sbjct: 13  DIGGTGTRIALLRDEHEVASESIPTAWFATLPQDRRAEALVDKICSLLPAESSLS----S 68

Query: 147 IGVALPGLVNPETGVVEYMPNVA-INELPLGATIRDEFHVECFVGNDVRGIALAEHYFGA 205
           +G+   G VN  T ++E    +A  +  PL   +R+   +   + ND    A+ E+  GA
Sbjct: 69  LGIGASGPVNNSTEIIENNDTLACFSYYPLVQQLRERLGILVAIDNDAVAAAIGEYQLGA 128

Query: 206 SQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQCQCGNFGCLETV 265
               Q  ++V++  G G  ++  GQ   G + +  E GHI +     +C CG  GC E +
Sbjct: 129 GHGSQRMMMVTLGTGIGVALLDRGQPLRGADGSHPEAGHIPVSSDPTRCYCGLQGCWEML 188

Query: 266 ATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANAGDELAKQALVRVGNQLGKAIA 325
           A+   +  +++K I  G + +  T        + +          Q + + G  +G+ + 
Sbjct: 189 ASREQLQKKLEKQIT-GLQWNAQT------PALLKALMTTRPRVAQVINQYGENVGRGLN 241

Query: 326 ITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLK 363
             + L+ P   V+ G        + P  Q  ++N  ++
Sbjct: 242 TLLALYRPDVTVLGGSAAP----LLPLFQPGLDNALMR 275