Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., ROK family transcriptional regulator from Dickeya dianthicola ME23

 Score =  111 bits (278), Expect = 3e-29
 Identities = 88/355 (24%), Positives = 167/355 (47%), Gaps = 24/355 (6%)

Query: 17  SAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQASTGGRRAISL 76
           +A + RLI +  PIS+  +   S+L+ ++V++ T +LL +G+I+E+  +  + GR    L
Sbjct: 7   TARILRLIVEHAPISQSDLKVRSELSMSTVSQATNRLLSQGIIQELGLRRVSMGRPKTLL 66

Query: 77  TTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMSSLIKQIKQFIQQ 136
                    + +++  +   + + DL GN L ++       T   L  +L + ++    +
Sbjct: 67  GLNADYATVVGIQLNAERNLIVMTDLSGNLLGEQQIPSGELTPRQLSDALARFLRTVQDK 126

Query: 137 HTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFHVECFVGNDVRGI 196
           H        AIG+A+ GLV+P  G       +  +++P+ + + + F +  F+ ND   +
Sbjct: 127 HVG------AIGLAISGLVDPLNGYCIRSKVLDWDQVPITSMLEERFSLPVFIENDANAM 180

Query: 197 ALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQCQC 256
           A+A   FG   +   +I+ +  +G GAGII+  Q++ G N   GEIG+     LG+    
Sbjct: 181 AMAALVFGQLGNASSAIIATYGKGIGAGIILGRQLYRGRNGKAGEIGNAL---LGD---- 233

Query: 257 GNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANAGDELAKQALVRV 316
           G+   LE VA++ AI  ++  L      +SL+ LD      + +            L   
Sbjct: 234 GSERLLEEVASSRAILQQIAALNGGDAPTSLAELDLRPSAAILD-----------TLSEA 282

Query: 317 GNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFHQHLPI 371
           G+ LG ++A     F+P  + +A +   A  I+   + ++ +   LK   Q  P+
Sbjct: 283 GHHLGLSLANLAVAFDPDVVYLAMEPQMASHILLDQVTQSFQKHRLKLTPQMTPL 337