Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., ROK family transcriptional regulator from Dickeya dadantii 3937

 Score =  303 bits (777), Expect = 5e-87
 Identities = 157/401 (39%), Positives = 248/401 (61%), Gaps = 2/401 (0%)

Query: 4   GQIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVA 63
           GQ G++D +KQ+N+  VYRLID+ GPISRI+++  +QLAPAS+TKI R+L+E  L++E  
Sbjct: 5   GQPGHIDQIKQMNAGGVYRLIDENGPISRIELSKQAQLAPASITKIVRELMEAHLVRETE 64

Query: 64  -QQASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVL 122
            Q   + GR AI L  + + +H ++VRIG   + L+L DL G+ +V+E  +        L
Sbjct: 65  YQDMGSRGRPAIGLVLDTEAWHYLSVRIGNQVMTLALRDLSGHLVVEELVDLPTEHPQSL 124

Query: 123 MSSLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDE 182
           +  ++ +I QF  +H   +++L AI +  PG+V+  TG++  MP   + E+ +G  +   
Sbjct: 125 LDRILAEIDQFFIRHQRKLERLTAIAITSPGMVDSSTGIIHRMPFYDVEEMAIGPALEKR 184

Query: 183 FHVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEI 242
             V  ++ +D+    +AE  FGAS+ CQ+ I + +    GAG+I  G++    +R + EI
Sbjct: 185 TGVPVYLQHDICAWTMAEALFGASRGCQNVIQIVIDHNVGAGVITGGRILHAGSRTLVEI 244

Query: 243 GHIQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHA 302
           GH Q+DP G++C CGN GCLETVA+  ++    Q+ + +G  SSL     +T++ +C+ A
Sbjct: 245 GHTQVDPYGKRCYCGNHGCLETVASIESMLELAQQRL-KGSMSSLLHGSLLTVESLCDAA 303

Query: 303 NAGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSL 362
             GD+LAK  +V VGN +G+  AI VNLFNP+KI+I   +  A +I++PAI   V  Q+L
Sbjct: 304 LKGDQLAKDIIVDVGNNVGRITAIMVNLFNPEKILIGSPLNQAADILYPAIIDCVRRQAL 363

Query: 363 KTFHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403
             +  HL + S+  Y Q T+   A+IK A+ NG LL KL++
Sbjct: 364 PAYSHHLQVTSTHFYNQGTVPGAALIKDALYNGSLLIKLMQ 404