Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score =  100 bits (250), Expect = 6e-26
 Identities = 77/343 (22%), Positives = 162/343 (47%), Gaps = 8/343 (2%)

Query: 8   NVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQAS 67
           N   ++  N   +  L+ +Q   ++  +A ++Q++  +V+ I ++L     +  +  ++ 
Sbjct: 6   NNQQIRHNNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQ 65

Query: 68  TGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDV-LMSSL 126
           T G  + +     +   ++ + +    I+  +     N+ +    EF Y   D     +L
Sbjct: 66  TRGHSSGTWLIAPEGDWTLCLNVTPTSIECQV----ANACLSPKGEFEYLQIDAPTPQAL 121

Query: 127 IKQIKQFIQQHTALI-DQLIAIGVALPGLVNPETGVVEYMPNVA-INELPLGATIRDEFH 184
           + +I++   +H  L  D+ I + +A+ G V+P TGV + MP       + +   + ++  
Sbjct: 122 LSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKLG 181

Query: 185 VECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGH 244
           +   V ND   +ALAE +   SQ+ +D  +++V  G G+  ++N Q++ G     G+IGH
Sbjct: 182 IRVMVDNDCVMLALAEKWQNNSQE-RDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH 240

Query: 245 IQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANA 304
             ++P G  C CG +GCLETVA+  A+  + +  +     S+    + +T   +     +
Sbjct: 241 TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVSTQLDPEKLTTAQLIAAWQS 300

Query: 305 GDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKE 347
           G+      + R  N +G ++   +N+ N  +I + G+  A  E
Sbjct: 301 GEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGE 343