Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., N-acetylglucosamine-inducible nag divergent operon transcriptional repressor from Escherichia coli BL21

 Score =  484 bits (1245), Expect = e-141
 Identities = 241/400 (60%), Positives = 303/400 (75%), Gaps = 1/400 (0%)

Query: 5   QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQ 64
           QIGNVDLVKQLNSAAVYRLIDQ GPISRIQ+A+ SQLAPASVTKITRQL+ERGLIKEV Q
Sbjct: 8   QIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQ 67

Query: 65  QASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
           QASTGGRRAIS+ TE + FH+I VR+GR    ++L+DL    L +EH+     TQ  L  
Sbjct: 68  QASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEH 127

Query: 125 SLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFH 184
           +L+  I QFI  +   + +LIAI V LPGLV+P++G + YMP++ +    L   + + F 
Sbjct: 128 ALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFK 187

Query: 185 VECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGH 244
           V CFVG+D+R +ALAEHYFGASQDC+DSILV VHRGTGAGII NG++F+G N NVGEIGH
Sbjct: 188 VTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGH 247

Query: 245 IQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANA 304
           IQ++PLGE+C CGNFGCLET+A N AI  RV  L+ QGY+S +  LD  TI  +C+ AN 
Sbjct: 248 IQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRV-PLDDCTIKTICKAANK 306

Query: 305 GDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKT 364
           GD LA + +  VG  LGK IAI +NLFNPQKIVIAG+IT A +++ PAI+  +  Q+LK 
Sbjct: 307 GDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCINTQALKA 366

Query: 365 FHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLED 404
           F  +LP+V S++  +  +GAFA++KRAMLNG+LLQ LLE+
Sbjct: 367 FRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN 406