Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 1/229 (0%)

Query: 19  AVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQASTGGRRAISLTT 78
           AV R + ++G  SR+++A++  +  A+++ +TR LLERG+I E  ++ +  G   I+L  
Sbjct: 15  AVLRYLRRRGSASRVEIAELCGVTAAAISMMTRDLLERGVILEGERRQAGRGAPHINLKL 74

Query: 79  EVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMSSLIKQIKQFIQQHT 138
                +++ V   R  + L+L D  G+ L +      Y+T + +   +I+   + +QQ  
Sbjct: 75  NPSVGYALGVHCNRFSVALTLLDFCGDVLGELRCPGRYDTFEDVREEIIEGKAKLLQQAD 134

Query: 139 ALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELP-LGATIRDEFHVECFVGNDVRGIA 197
              + L+  G+A+P         ++    V     P L A+++        + ND     
Sbjct: 135 LEDEVLVGAGIAMPTRFRQGASFLDLAQEVVSWSGPDLAASLQKGLGCAVRIENDANAAV 194

Query: 198 LAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQ 246
           + E   G + D ++ + + +  G G GII+  Q++ G   N GEIG ++
Sbjct: 195 MGELTLGNAADHENFVYLYLSEGIGGGIIIGKQLYRGNFGNAGEIGALR 243