Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., transcriptional regulator from Agrobacterium fabrum C58

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 78/344 (22%), Positives = 136/344 (39%), Gaps = 18/344 (5%)

Query: 6   IGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQ 65
           I + +LV+Q NS +V   +   G +S   ++  + LA A+V+ IT  L   GLI    Q 
Sbjct: 8   IASTELVRQKNSLSVMAALRLYGSLSHTDMSSFTGLASATVSVITTDLERTGLILRKEQI 67

Query: 66  ASTG-GRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
           A+ G GR  I         H   + I  D +Q SL D  G  LVD   E     +     
Sbjct: 68  AAAGRGRPRILFAPNGAFCHVAIIIISSDSVQYSLVDYAGK-LVDRFTEQRITAEKGSFG 126

Query: 125 -SLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEF 183
            S++  + +   +       ++ + ++  GLV+    V+ + P +   ++     I    
Sbjct: 127 GSILSGLARLADRSRIDRHDILQVSISSKGLVDAAAAVLVWSPVLGTEKIDFQQLISQGG 186

Query: 184 HVECFVGNDVRGIALAEHYFGASQDCQDS------ILVSVHRGTGAGIIVNGQVFLGYNR 237
            +   + N+     LA       +  +D       + +S+    G GI  +G   +  + 
Sbjct: 187 RIRVTLNNET---LLAAKAIWMREQAKDGPKPEALVTLSLGHSIGLGIARSGAGTIEVSA 243

Query: 238 -NVGEIGHIQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITID 296
            N G + H+     G  C+CG  GC+E  +   AI     +   Q   +    +    +D
Sbjct: 244 PNFGHMLHLAD---GALCRCGTRGCIEAYSGFYAILRSAFEAPPQAEPAKF--VPVAEVD 298

Query: 297 DVCEHANAGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAG 340
            +   A AG  +A+ A    G  LG  ++   +L     + I G
Sbjct: 299 KIAASARAGARMARFAFRTAGLALGNGLSRLFSLHGHMPVFITG 342