Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 78/342 (22%), Positives = 152/342 (44%), Gaps = 25/342 (7%)

Query: 10  DLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLI--KEVAQQAS 67
           +L++ +N  +V   I + GPISR+++++ +QL+  +V+ IT  LL+ GLI  + +    +
Sbjct: 7   ELMRAINRLSVLDSIRRHGPISRVEISERTQLSTTTVSAITASLLDDGLILTRHIGDIRT 66

Query: 68  TGGRRAISLTTEVKP--FHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDV-LMS 124
            G R    +  E+ P     +  +I  + +   + D  GN L         + Q + +++
Sbjct: 67  EGARGRPRVMLELNPDAARVVGAKIAANRMVFVVTDFCGNVLSTLALPIRVDRQPIGVIA 126

Query: 125 SLIKQ-IKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEF 183
            L++  +++ +      ++ +  + + LPG++   TG +   P +    +     +    
Sbjct: 127 DLVEDGVRRCVVDAGLSLEDVDMVCLGLPGVIEHRTGRIRSSPILREVNVNFAEEMTARL 186

Query: 184 HVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIG 243
           +    + +D   I LA H+FG ++D +D +L+S+ +  G G++   Q+F G       +G
Sbjct: 187 NSPTIIESDAHAITLAHHWFGHARDLEDMVLISLEQTLGLGVLHQNQLFRGAGGLSHNLG 246

Query: 244 HIQIDPLGEQCQCGNFGCLETVATNPAITSR-VQKLIAQGYESSLSTLDTITIDDVCEHA 302
            + I    E    G          N  + SR V    A          + I +    +HA
Sbjct: 247 DLVIGLANE----GTVRLASQAGENAILGSRPVDGRFA----------EAIRLGRGMQHA 292

Query: 303 N----AGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAG 340
           +    A D     A +R G  LG  +A  V LF P +++I G
Sbjct: 293 HALIAAEDHDLIAAALRAGAALGLTLANIVTLFAPPRVIITG 334