Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., transcriptional regulator, ROK family from Agrobacterium fabrum C58

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 16/264 (6%)

Query: 1   MNGG--QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGL 58
           M+GG  QIG    V+  N   V  L+ + G +S+ +++ +  L+  +V+ I R L + GL
Sbjct: 18  MSGGANQIG----VRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQTVSVIMRSLEKDGL 73

Query: 59  IKEVAQQASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNT 118
           +    +     G+ +  +        S  V+IGR  + L L D  G   +     + Y  
Sbjct: 74  LIRGERLRGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGRIRLKLRKTYPYPM 133

Query: 119 QDVLMSSLIKQIKQFIQQHTALIDQLIA-IGVALP-GLVN--PETGVVEYMPNVAINELP 174
            + ++  +I+ I +   + +A+  Q IA +G+A P  L N   E G  +        ++ 
Sbjct: 134 PEWILPFVIEGISELESKLSAVERQKIAGVGIAAPFELWNWAQEVGAPQ-AEMERWRDVD 192

Query: 175 LGATIRDEFHVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLG 234
           + + I +      F+ ND      AE  FGA Q+  D + V +    G G+++N  +F G
Sbjct: 193 IRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIGGGVVLNSALFSG 252

Query: 235 YNRNVGEIGHIQIDPLGEQCQCGN 258
                G IG     PL  Q Q GN
Sbjct: 253 KTGTAGAIG-----PLPVQGQDGN 271