Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., Putative cation/proton antiporter YbaL from Xanthobacter sp. DMC5

 Score =  129 bits (323), Expect = 4e-34
 Identities = 138/560 (24%), Positives = 252/560 (45%), Gaps = 62/560 (11%)

Query: 9   AFLAGFIALKCHLPPLVGFLIAGFALNAY--GFTSNDTLSL-LADLGVTLLLFTIGLKLE 65
           AF+ G +A +  L PLVG+L+AG  +  +  GF +++ L+L LA++GV LL+F +GL   
Sbjct: 18  AFVLGAVAQRLKLSPLVGYLLAGVLVGPFTPGFVADEHLALELAEIGVILLMFGVGLHFS 77

Query: 66  VKTLLAKEIWA--GSTIHNLLSTALFTLLLLIFKQLGLDSLADLSFDKLILIGFALSFSS 123
           +  LL+ +  A  G+ +   ++TA+          +GL      S    I+ G ALS +S
Sbjct: 78  LSDLLSVKAIAIPGAIVQIGVATAM---------GIGLTWAMGWSLGAGIVFGIALSVAS 128

Query: 124 TVFAVKSLQEKGEMNATYGTLAIGILVMQD---IFAVVFLTASTGKLP---------EWY 171
           TV  +++LQE+  + +  G +A+G L+++D   + A+V L A +G L          +W 
Sbjct: 129 TVVLLRALQERRMVESEQGRIAVGWLIVEDLAMVLALVLLPALSGALGGRTVTTGTIDWL 188

Query: 172 AIG------------------LFVLPLLRPLFYELLDWVGH---GEMLVLFGIFFALVVG 210
            +G                  + +L + R +   ++ WV H    E+  L  +  AL V 
Sbjct: 189 GLGGDVWTTLAVTLVKVAGFVVLMLVVGRRVIPWIMHWVAHIGSRELFRLAVLAIALGVA 248

Query: 211 AGSFQLVGMKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHPT--- 267
            GS +L G+   LGA   GM+L+    +   ++    L++ F V FF+++G+   P+   
Sbjct: 249 FGSAKLFGVSFALGAFFAGMVLSESPLSHRAAEETLPLRDAFAVLFFVSVGMLVDPSIVL 308

Query: 268 TTGIMLALLLLLLLPIKGVLYFWVIHQFHFRVRTSLLASLSLFNFSEFGLIVGGLAFKMG 327
            + I L + +L++L  K +  F ++  F +   T+   S SL    EF  I+  L   + 
Sbjct: 309 KSPIPLLVTVLIVLFGKSIAAFLIVRAFGYGNSTAFTISASLAQIGEFSFILVALGVDLQ 368

Query: 328 WINSD----ILVALAVSVPLSFILAAPIERKGHAIYQRSAKWLKEQAAESLHTRDRLIDP 383
            + ++    IL A  +S+  +      ++R  +   Q   +  K  AA        +   
Sbjct: 369 LLPAEGRDLILAAAIISILANPFFFLVLDR--YRARQAPLRPEKTPAAAPAPAPKPVPAL 426

Query: 384 GEA----QVLILGMGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGRNVISGDATD 439
            E       +++G GR+GR   + L +  G   L +E + +     +  G   ++ +A  
Sbjct: 427 PETALTNHTVLVGYGRVGRLVADGLKAA-GTPFLVIEDQGDRLEELKRMGLEAVNANAAS 485

Query: 440 PDFWERIFDTGKVKLVLLAMPHHQANQIALEQLQKRHYQGQIAAIAEYPDQIESLLEHGA 499
                     G  + ++LA+P        L++ ++ +   +I A A    ++E L + GA
Sbjct: 486 APAITAANVAG-ARRIILAIPDGFEASNVLKKARQLNPGIEIVARAHSDAEVEHLRQSGA 544

Query: 500 HAAFNIYSEAGTGFARHVCE 519
           +       E   G   HV E
Sbjct: 545 NFIIMGEREVARGMLAHVLE 564