Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., Inner membrane protein YbaL, KefB/KefC family from Variovorax sp. SCN45

 Score =  136 bits (342), Expect = 2e-36
 Identities = 128/478 (26%), Positives = 219/478 (45%), Gaps = 54/478 (11%)

Query: 6   LSAAFLAGFIALKCHLPPLVGFLIAGFALNAY--GFTSNDTLSL-LADLGVTLLLFTIGL 62
           L  A + GF+A K  LP LVG+L+AG  +  +  GF ++  ++  LA++GV LL+F +GL
Sbjct: 15  LGLALVFGFLAAKLRLPALVGYLLAGVIIGPFTPGFVADAGIAAQLAEIGVMLLMFGVGL 74

Query: 63  KLEVKTLLAKEIWAGSTIHNLLSTALFTLLLLIFKQLGLDSLADLSFDKLILIGFALSFS 122
              +  LLA    A       L  AL  + +      GL      S    ++ G ALS +
Sbjct: 75  HFSLDDLLAVRKIA-------LPGALAQIAVATLLGGGLAMWWGWSPGAALVFGLALSVA 127

Query: 123 STVFAVKSLQEKGEMNATYGTLAIGILVMQD---IFAVVFLTASTGKL-----------P 168
           STV  +++L+  G +++  G +AIG LV++D   +  +V +    G L           P
Sbjct: 128 STVVLLRALESLGILDSFTGRIAIGWLVVEDLAMVLVLVLMPPLAGTLGGHAAQEGPADP 187

Query: 169 EWYAIGLFVL------PLLRPLFYELLDWV-------GHGEMLVLFGIFFALVVGAGSFQ 215
            W  +GL +L       L+  +   +  W+       G  E+  L  +  A+ +   S  
Sbjct: 188 LWQTLGLTLLQVGGFVALMLVVGRRVFPWILWQVTRTGSRELFTLCVVAAAVSIAFASAA 247

Query: 216 LVGMKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHPTT---TGIM 272
           L G+   LGA   GM++     A   ++    L++ F V FF+++G+   P+      + 
Sbjct: 248 LFGVSFALGAFFAGMVMRESQFAHRAAEESLPLRDAFAVLFFVSVGMLFDPSVLIERPLQ 307

Query: 273 LALLLLLLLPIKGVLYFWVIHQFHFRVRTSLLASLSLFNFSEFGLIVGGLAFKMGWI--- 329
           +  ++L+++  K +    ++  F + + T+L  S SL    EF  I+ GL   +G +   
Sbjct: 308 VLAVVLVIVLGKSLAACALVLVFRYPLGTALTVSASLAQIGEFSFILAGLGVSLGLLPVE 367

Query: 330 -NSDILVALAVSV---PLSFILAAPIER--KGHAIYQRSAKWLKEQAAE-SLHTRDRLID 382
             S +L    +S+   PL F L AP+++    H+ + R  +   +  AE  + T  + + 
Sbjct: 368 GQSLVLAGALISIATNPLWFSLIAPMQKWLHAHSSFARGLESRDDPLAELPMTTEAKYL- 426

Query: 383 PGEAQVLILGMGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGRNVISGDATDP 440
               QV+++G GR+GR    EL +      +  E   E     RE G   + GDA DP
Sbjct: 427 --SRQVVLVGYGRVGRRIAAELDANDIPYVV-AEQNRELVEKLREAGTPAVWGDAADP 481