Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., Kef-type potassium/proton antiporter, CPA2 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  113 bits (283), Expect = 2e-29
 Identities = 137/536 (25%), Positives = 240/536 (44%), Gaps = 63/536 (11%)

Query: 3   LILLSAAFLAGFIALKCHLPPLVGFLIAGFAL--NAYGFTSN-DTLSLLADLGVTLLLFT 59
           ++ L AA L   +A +  L  ++G+L AG  +  +  G   + +++S +++LGV LLLF 
Sbjct: 12  VVFLLAAVLTVPLAKRLKLGAVIGYLFAGVVIGPSVLGLIGDTESVSHISELGVVLLLFI 71

Query: 60  IGLKLEVKTL--LAKEIWAGSTIHNLLSTALFT--LLLLIFKQLGLDSLADLSFDKLILI 115
           IGL+L  K L  + K ++ G  +  +L T L    +    F Q         S +   ++
Sbjct: 72  IGLELSPKRLWVMRKSVF-GVGMAQVLLTGLIIGGVAFAAFGQ---------SLNTAAIL 121

Query: 116 GFALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFA------VVFLTASTGKLPE 169
           G  L+ SST F ++SL E+ ++N+ +G +A  IL+ QDI A      V FL  +   +  
Sbjct: 122 GLGLALSSTAFGLQSLAERKQLNSPHGRMAFAILLFQDIAAIPLIAMVPFLAGADHAMDT 181

Query: 170 WYAI--GLFVLP-----------LLRPLF-----YELLDWVGHGEMLVLFGIFFALVVGA 211
             +I  GL VL            LLRP+F      ++ +      +LV+ G        A
Sbjct: 182 GESINHGLRVLGSIAIVVIGGRYLLRPVFRIVAKTKIQEVSTATALLVVIGT-------A 234

Query: 212 GSFQLVGMKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHP---TT 268
              +LVG+   LGA + G++LA      EL   +   K L L  FF+++G+ A+     +
Sbjct: 235 WLMELVGVSMALGAFLAGLLLADSEYRHELEAQIEPFKGLLLGLFFISVGMGANVGLLLS 294

Query: 269 TGIMLALLLLLLLPIKGVLYFWVIHQF-HFRVRTSLLASLSLFNFSEFGLIVGGLAFKMG 327
           + +++  L LLL+ IK  + F +         R++L   L L    EF  +V  +    G
Sbjct: 295 SPLIVLGLTLLLIAIKLPMLFLIGRTLGELNNRSALQLGLVLAAGGEFAFVVFKIGSAQG 354

Query: 328 WINSDILVALAVSVPLSFILAAPIERKGHAIYQRSAKWLKEQAAE-SLHTRDRLIDPGEA 386
              + +   L +++ LS  +          ++   A+W+K +     +    R I   + 
Sbjct: 355 LFEAGLYDMLVLTITLSMAVTP-------LLFIALARWIKPKVKPVEVPEEYRDIQTDKP 407

Query: 387 QVLILGMGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGR-NVISGDATDPDFWER 445
           +V+I GMGR+G+     L ++     + ++   E+    R  G   V  GD   P+   R
Sbjct: 408 RVVIAGMGRMGQIVARILRAQKIPF-IALDTAVESIEFSRSFGNVPVFYGDPLRPEIL-R 465

Query: 446 IFDTGKVKLVLLAMPHHQANQIALEQLQKRHYQGQIAAIAEYPDQIESLLEHGAHA 501
                + +  ++A      N    E ++K +   +I A A     +  L++ GAHA
Sbjct: 466 AAKVDEAEYFVIATDDPDTNIKTAELIRKLYPHMKIIARARNRQHVHRLMDLGAHA 521