Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 176 a.a., Transcription termination/antitermination protein NusG from Xanthobacter sp. DMC5

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 14/169 (8%)

Query: 2   KRWYLLYCKRGEQQRAKMHLENQS---------VECFYPEVCVEKILRGKRQMVQEPLFP 52
           KRWY+++     +++    +  Q+          +   P   V ++ RG++   +   FP
Sbjct: 3   KRWYIVHAYSNFEKKVADSIREQADQRGLTDLFEQILVPTEKVVEVRRGRKVDTERKFFP 62

Query: 53  SYMFVRFDFENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQL 112
            Y+ V+ D  +  +F  +++T  V  F+     P  +      ++ Q   E ++     +
Sbjct: 63  GYVLVKMDLTD-EAFHLIKNTPKVTGFLGADNKPMPISESEAMRILQQVQEGIERPKPSI 121

Query: 113 P-EKGQTVRVARGQFAGIEAIYLEPDGDTRSIM--LVKMISQQVPMSIE 158
             E G+TV+V+ G FA    I  E D D+RS +   V +  +  P+ +E
Sbjct: 122 SYEVGETVKVSDGPFASFNGIVEEVD-DSRSRLKVAVSIFGRATPVELE 169