Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 186 a.a., transcription termination/antitermination factor NusG from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 55.5 bits (132), Expect = 5e-13
 Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 22/175 (12%)

Query: 3   RWYLLYCKRGEQQRAKMHLENQ----SVECFYPEVCV--EKILR---GKRQMVQEPLFPS 53
           +WY++    G++++AK +LEN+    +++ + P+V +  EK+     GK+++ +   FP 
Sbjct: 5   KWYVVRAVSGQEKKAKAYLENEIMRHNLDEYVPQVLIPAEKVYEMRGGKKRIRERSFFPG 64

Query: 54  YMFVRFDFENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLP 113
           Y+ V  D  +G +   + ST GV+ F  LG   +         L+Q +  ++     +  
Sbjct: 65  YVLVHADLSHGEAEHIIISTPGVIGF--LGTEEKGAASKKPVPLRQSEVNRILGTVDEAE 122

Query: 114 EK----------GQTVRVARGQFAGIEAIYLEPDGDTRSI-MLVKMISQQVPMSI 157
           E+          G+ V+V  G F+G      E   + + + ++VK+  +  P+ +
Sbjct: 123 EQTEVLDTPFVVGEIVKVMDGPFSGFSGTVEEVFEERKKLNVMVKIFGRNTPVEL 177