Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., transcriptional activator RfaH from Magnetospirillum magneticum AMB-1

 Score = 58.9 bits (141), Expect = 4e-14
 Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 3/159 (1%)

Query: 1   MKRWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFD 60
           M+ W++++     ++ A  HL+ Q  + + P+    +    K + V+ PLFP Y+F+R D
Sbjct: 1   MESWFVVHTHANAEKIAAGHLQRQHFDVYLPQYSKRRSHARKVEWVKAPLFPRYLFLRMD 60

Query: 61  FENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLK-QLDCEQLKHATKQLP-EKGQT 118
            +  P F ++RST GV   V  G  P  L   +I +++ + D   L    + +P   GQ 
Sbjct: 61  PDLTPWF-SIRSTVGVHSLVCRGGMPVPLGQVIIDEIRGREDDSGLVSLGEAMPFASGQR 119

Query: 119 VRVARGQFAGIEAIYLEPDGDTRSIMLVKMISQQVPMSI 157
           + +  G  A    ++   D   R ++L+ ++ +QV + +
Sbjct: 120 LEIVEGPLAEQLGLFQGLDDMNRVVLLLDLLGRQVRVRV 158