Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., Transcriptional activator RfaH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  149 bits (377), Expect = 2e-41
 Identities = 74/160 (46%), Positives = 108/160 (67%), Gaps = 3/160 (1%)

Query: 1   MKRWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFD 60
           M+ WYLLYCKRG+ QRA+ HLE Q+V C  P + +EK++RGKR  V EPLFP+Y+FV FD
Sbjct: 1   MQSWYLLYCKRGQLQRAQEHLERQAVSCLTPMITLEKMVRGKRTSVSEPLFPNYLFVEFD 60

Query: 61  FENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLPEKGQTVR 120
            E   + TT+ +TRGV  FVR G HP  +   +I+QL     E +     + P  G +V 
Sbjct: 61  PEVIHT-TTINATRGVSHFVRFGAHPAIVPSSVIHQLSIYKPEGV--VDPETPYPGDSVI 117

Query: 121 VARGQFAGIEAIYLEPDGDTRSIMLVKMISQQVPMSIENT 160
           +  G F G++AI+ EPDG+TRS++L+ +++++V  S++NT
Sbjct: 118 ITEGAFEGLKAIFTEPDGETRSMLLLNLLNKEVKQSVKNT 157