Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Transcription antiterminator from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 4/155 (2%)

Query: 4   WYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFDFEN 63
           WY++Y     ++R    LE + V  + P +   +    +++ V+ PLF  Y+FVR D   
Sbjct: 7   WYVMYTAPRAEKRVAQRLEEKGVTAYLPMIEEVRQWSDRKKKVKRPLFNGYIFVRSDKSR 66

Query: 64  GPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQL-DCEQLKHATKQLPEKGQTVRVA 122
                     +G V FV        ++   I  +K++ +            E+GQ V++ 
Sbjct: 67  ---LWEALQVQGAVKFVNFSGDHAVVRDSEIEAIKRIVETGVAVEVETTHIEEGQQVKII 123

Query: 123 RGQFAGIEAIYLEPDGDTRSIMLVKMISQQVPMSI 157
            G   G E   ++       I+ V  I Q V ++I
Sbjct: 124 GGPLQGFEGECIQKGNQDFFIIRVPSIHQTVMVNI 158