Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., transcription termination/antitermination factor NusG from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.1 bits (131), Expect = 6e-13
 Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 21/174 (12%)

Query: 3   RWYLLYCKRGEQQRAKMHLEN----QSVECFYPEVCV--EKILR---GKRQMVQEPLFPS 53
           +WY+L    G++++AK +L+N    Q +E + PEV +  EK+     GK+++ +   FP 
Sbjct: 5   KWYVLRVVAGQEKKAKSYLDNEITRQKLEDYIPEVLIPSEKVYEMRNGKKRVRERNFFPG 64

Query: 54  YMFVRFDFENGPSFTTVRSTRGVVDFVRLG-------PHPRELQ--GDLIYQLKQLDCEQ 104
           Y+ V  D  +G +   + S  GV+ F+          P P        ++ +++ +D   
Sbjct: 65  YVLVNADLSHGEANHVITSIPGVIGFLGANAGGASKTPEPLRQSEINRILGRVEGIDEFA 124

Query: 105 LKHATKQLPEKGQTVRVARGQFAGIEAIYLEPDGDTRSI-MLVKMISQQVPMSI 157
            K  T  +   G+T++V  G F+G      E   D + + ++VK+  +  P+ +
Sbjct: 125 EKLDTPYI--VGETIKVMDGPFSGFSGTIEEVFEDKKKLNVMVKIFGRNTPVEL 176