Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., oligopeptide:H+ symporter from Rhodanobacter sp000427505 FW510-R12

 Score =  356 bits (914), Expect = e-102
 Identities = 201/494 (40%), Positives = 294/494 (59%), Gaps = 22/494 (4%)

Query: 30  QPNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDESASFVLFGAFSALVYGFVAIGG 89
           Q  +F  +F IE WERFGFYGMQ ++  YMVK +G  +S + +++GA +AL+Y   AIGG
Sbjct: 10  QTRSFSTVFLIEMWERFGFYGMQVLMVTYMVKKLGFVDSKANLIWGAAAALIYATPAIGG 69

Query: 90  WIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGLFKANP 149
           W+GDK+IGT+R + LGA+V+ +GYV+L +     P      +YIA+G I VGNG FK N 
Sbjct: 70  WVGDKLIGTRRTMLLGAMVLTLGYVMLWI-----PTNNAYFLYIALGVIIVGNGFFKPNA 124

Query: 150 SSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMG--YG------MAFGV 201
            +L+ KIY  +D ++D AFT+YYMA+N+GS  SM++TP +   +G  YG       AFGV
Sbjct: 125 GNLVRKIYEGDDTKIDSAFTIYYMAVNIGSTISMLLTPWIRDYVGAKYGDAWGWHTAFGV 184

Query: 202 SAVGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNLTLA 261
            AVGL   +VN+    R L   GSPAD  PV+   L  V + +I    V +++LQ+ T+A
Sbjct: 185 CAVGLVFGLVNYTLMHRTLAHIGSPADDKPVDVKRLGTVLLAAIGMVFVSAFILQDQTVA 244

Query: 262 HGILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFAIN 321
              +  AG+ ILG +     S    ERA ++ A +L +Q + FF+ Y QM TSLN FA  
Sbjct: 245 KWCVYAAGVVILGIFVHLIRSSEQHERAGLVAALVLTVQTIFFFIFYQQMSTSLNLFAQR 304

Query: 322 NV--EHHIFG---FDVAPEQFQALNPFWIMIASPILAATY---GKLGDKLAMPFKFAFGM 373
           NV     +FG   F+  PEQFQ+LN  WI++ SP+L   Y   GK+G   ++  KFA+G 
Sbjct: 305 NVALSFDLFGLHLFNWIPEQFQSLNALWIVLLSPVLVFIYNTMGKVGKNPSVAAKFAWGF 364

Query: 374 ALCALSFLVLSWGTLFANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMG 433
           A  A+ F +   G  FA   G +SS  ++  Y   S+GELLVSGLGLAM+A+ VP RM G
Sbjct: 365 AAVAIGFFIYGVGARFA-VNGQVSSWIMLWGYGLYSLGELLVSGLGLAMIARYVPARMGG 423

Query: 434 FAMGMWFLTSASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTFM 493
           F MG +++ S  +  +   VA+  S P +++    SL +Y  +F ++G+      ++   
Sbjct: 424 FMMGAYYVASGLSQYLGSVVANFASIPTDITDPLVSLPVYTSLFNKLGFAGVACTVIALA 483

Query: 494 IAPKLTRICRGESE 507
           + P + ++    S+
Sbjct: 484 MLPLMKKLSSSHSD 497



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 19/146 (13%)

Query: 105 GAIVMMVGYVLLGLST--ADHPLVGPTLIYIAMGFITVGNGLFKANPSSLLAKIYPENDP 162
           G   + +G+ + G+    A +  V   ++    G  ++G  L      +++A+  P    
Sbjct: 363 GFAAVAIGFFIYGVGARFAVNGQVSSWIMLWGYGLYSLGELLVSGLGLAMIARYVPARM- 421

Query: 163 RLDGAFTM--YYMAINLGSFFSMIIT-----------PLVAIKMGYGMAFGVSAVGLAIT 209
              G F M  YY+A  L  +   ++            PLV++ +   +   +   G+A T
Sbjct: 422 ---GGFMMGAYYVASGLSQYLGSVVANFASIPTDITDPLVSLPVYTSLFNKLGFAGVACT 478

Query: 210 VVNFLFCLRMLKGTGSPADLMPVNKM 235
           V+       M K + S +D +  N +
Sbjct: 479 VIALAMLPLMKKLSSSHSDSVANNPL 504