Pairwise Alignments

Query, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  194 bits (492), Expect = 8e-54
 Identities = 134/477 (28%), Positives = 241/477 (50%), Gaps = 19/477 (3%)

Query: 30  QPNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDESASFVLFGAFSALVYGFVAIGG 89
           QP A Y + +++ WE F FYGM+A+L +Y+   +  +++ ++ LF A+ +LVY    +GG
Sbjct: 7   QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYVTPILGG 66

Query: 90  WIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNGLFKANP 149
           ++ DKV+G + A+ LGA++M +G+V+LG S      + P+ +Y+++  I  G GLFK+N 
Sbjct: 67  FLADKVLGNRMAVMLGALLMAIGHVVLGASE-----IHPSFLYLSLAIIVCGYGLFKSNV 121

Query: 150 SSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGVSAVGLAIT 209
           S LL ++Y   DPR DG F++ Y A N+GS  + I       +  + M FG++AVG+   
Sbjct: 122 SCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAG 181

Query: 210 VVNFLFCLRMLKGT-GSPADLMPVNKMYL-----VLVAVGSIIASLVCSYLLQNLTLAHG 263
           +V FL   R    T G    ++      L     +LV + +  A +   +  +    A  
Sbjct: 182 LVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITILFWKEWSVYALI 241

Query: 264 ILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFAINNV 323
           +  + GL +L   +++A +    +R ++ +   L    ++F+    Q  +S++ +    V
Sbjct: 242 VATIIGLGVLAKIYRKAENQK--QRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFV 299

Query: 324 EHHIFGFDVAPEQFQALNPFWIMIASPILA--ATYGKLGDKLAMPF-KFAFGMALCALSF 380
              +FG+ V    FQ++N F +M+    LA        G++    + KFA G+ L +  F
Sbjct: 300 NRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGF 359

Query: 381 LVLSWGTLFANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAMGMWF 440
            +L+    ++   G  S   ++   A     EL +  + ++ + ++    + G   G++ 
Sbjct: 360 CILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYM 419

Query: 441 LTS-ASAAVIAGWVASLTSTPA-NVSGATE-SLHIYGEVFAQIGYVTAGIAIVTFMI 494
           L S A A  +AG +A  TS  + + SGA   S++ Y EVF QI +       +  MI
Sbjct: 420 LLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGLVLMI 476