Pairwise Alignments

Query, 294 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., lysine decarboxylation/transport transcriptional activator CadC from Serratia liquefaciens MT49

 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 21/242 (8%)

Query: 54  ILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDS-TKSPQYVKTV 112
           +L   A+ P+ V+SR++L D VW+     V +  +TQ+IS LRK LKD  T SP+Y+ TV
Sbjct: 36  MLQYFARHPDVVLSRDELIDNVWKRN--IVTNHVVTQSISELRKYLKDGDTNSPEYIITV 93

Query: 113 PKRGYQLIARVETVE-EEMARES--EAAHDISQPESVNEYAESSSV---PSSATVVNTPQ 166
           PKRGY+L A V   E +++A  +  + A  + +PE  ++ +E   V   P   T   TP 
Sbjct: 94  PKRGYKLAAPVMWCEGDDVATPAVPQVAVIMHEPEDGSDGSEEDEVAYEPPKPTKTKTPS 153

Query: 167 PANVVTNKSAPNLGNRLLILIA-----VLLPLAVLLLTNPSQTSFKPLTVVDGVAVNMPN 221
             +             L  L A     V + +A L    P  T    +   D + + +  
Sbjct: 154 VTSTTPFYRQSTFWVWLAFLAALSACVVFVAIATLSQRIPESTMPVLMNPRD-IDIRIQG 212

Query: 222 NHPDLSNWLPSIELCVKKYNEKHTGGLKPIEVIATGGQNNQLTLNYIHSPEVSGENITLR 281
            +   SNW P +   V   +E  T  L          Q N    NY   P  SG+++T+ 
Sbjct: 213 GN-SCSNWTPQLSYVV-GLSEVVTDSLNTYSTFLVHDQTN---YNYT-GPSSSGKSLTIE 266

Query: 282 IV 283
            V
Sbjct: 267 FV 268