Pairwise Alignments

Query, 294 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., DNA-binding winged-HTH domains from Enterobacter asburiae PDN3

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 29/177 (16%)

Query: 20  FILAEKFTFDPLSNTLIDKEDSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQ 79
           FI      FDP ++ +      E ++ L +   R+L    +     +SR +L   VW E 
Sbjct: 3   FICNNSLLFDPEAHAISLVGQPESVLTLSAPAVRLLQEFIKHKGCDLSREELITRVWEEF 62

Query: 80  GFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVPKRGYQLIARVETVEEEMARESEAAHD 139
           GF    ++L +A+S LRK  +   +  + + TVP+ G++  A V                
Sbjct: 63  GFTPSGNNLNKAVSELRKSFQSLGEGHELIVTVPRYGFRFEADV---------------- 106

Query: 140 ISQPESVNEYAESSSVPSSATVVNTPQPANVVTNKSAPNLGNRLLILIAVLLPLAVL 196
           I QP          ++PS+      PQP++            +  +++AVL+  A++
Sbjct: 107 IFQP--------GENIPSA-----DPQPSSATQEVKPQRASGKKWVIVAVLIVAALV 150