Pairwise Alignments

Query, 306 a.a., co-chaperone YbbN from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., thioredoxin from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 2e-40
 Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 4/283 (1%)

Query: 28  IIDVSQHNFHQ-VLQHSTLSPVLFYFWAPISHESAELLPAIEQLTERYQGAFVLARLNCQ 86
           I DV+   F Q V+Q+S   PVL  FWA        L+P + ++ E YQG  +LA+++C+
Sbjct: 8   IFDVTTATFDQAVIQNSFEKPVLVDFWAEWCAPCKALMPMLAKIAESYQGELLLAKVDCE 67

Query: 87  EEQGIAAQFGIQAIPTIALFIEGKPVDGLGGPQPIEAVEEMLKRHL---PSDEERLMYQG 143
            EQ I A+FGIQ++PT+ LF +G+PVDG  G QP  AV  +L+ H+   P      + Q 
Sbjct: 68  AEQDIVARFGIQSLPTVVLFKDGQPVDGFAGAQPESAVRALLEPHVQMPPPAAANPLEQA 127

Query: 144 FELAEQEQFSEALSLLSTLSDEWRNKGEVKLTLARCYLETGAVEAAQTELANMPLEYQQG 203
             L  + + S+A ++L  L  E        +  ARC  E G +  AQT L  +  +  + 
Sbjct: 128 QALFAEGRISDAEAVLVALLGEDNTNAAALILYARCLAERGELGEAQTVLDAVKSDDHKA 187

Query: 204 EYKTLIARLELHQQAANSPEIIALEQEWNSDPQNPNIAIELAKQYHHVKRDEEALSLLWS 263
                 A++   +QAA+ P+   L+     +PQ+   A +LA Q    ++ + AL  L  
Sbjct: 188 ALAGAKAQITFLRQAADLPDAADLKSRLAQNPQDDEAAYQLAIQQLARQQYDAALEGLLK 247

Query: 264 WLSKNLNTLDGEMKKTFMDILTALGQGHPLANQYRKKLYSLLY 306
              +N +  +G   K  + +   LG  HPL   YR+KL++ LY
Sbjct: 248 LFIRNRSYSEGLPHKALLQVFELLGNDHPLVTVYRRKLFAALY 290



 Score = 23.9 bits (50), Expect = 0.005
 Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 9   IVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHESAELLPAIE 68
           ++  A C   +G   +A  ++D  + + H+       + + F   A    ++A+L   + 
Sbjct: 157 LILYARCLAERGELGEAQTVLDAVKSDDHKAALAGAKAQITFLRQAADLPDAADLKSRLA 216

Query: 69  QLTERYQGAFVLARLNCQEEQGIAAQFGIQAIPTIALFIEGK 110
           Q  +  + A+ LA      +Q  AA  G+     + LFI  +
Sbjct: 217 QNPQDDEAAYQLAIQQLARQQYDAALEGL-----LKLFIRNR 253