Pairwise Alignments

Query, 306 a.a., co-chaperone YbbN from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., thioredoxin from Pseudomonas segetis P6

 Score =  146 bits (368), Expect = 6e-40
 Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 3/271 (1%)

Query: 39  VLQHSTLSPVLFYFWAPISHESAELLPAIEQLTERYQGAFVLARLNCQEEQGIAAQFGIQ 98
           V+++S   PVL  FWA        L+P + Q+TE YQG  +LA++NC  EQ I A+FGI+
Sbjct: 20  VVENSFNKPVLVDFWADWCAPCKALMPLLAQITESYQGELLLAKVNCDIEQDIVARFGIR 79

Query: 99  AIPTIALFIEGKPVDGLGGPQPIEAVEEMLKRHLPSD---EERLMYQGFELAEQEQFSEA 155
           ++PT+ LF +G+PVDG  G +    +  ML+ H+      +E L     +L  + Q   A
Sbjct: 80  SLPTVVLFKDGQPVDGFAGAKLESEIRAMLQPHVAEPAPAQENLFDSASKLFAEGQVDAA 139

Query: 156 LSLLSTLSDEWRNKGEVKLTLARCYLETGAVEAAQTELANMPLEYQQGEYKTLIARLELH 215
            + L  L  E  +     +  ARC  E G +  AQT L  +  +  +       A+L   
Sbjct: 140 EAQLKQLLGEDNSNAPALILYARCLAERGELTEAQTVLDAVSGDEHKQALNGAKAQLTFL 199

Query: 216 QQAANSPEIIALEQEWNSDPQNPNIAIELAKQYHHVKRDEEALSLLWSWLSKNLNTLDGE 275
           +QAA  P+   L+     +P++     +LA Q    ++ E AL  L     +N N  DG 
Sbjct: 200 RQAAELPDAAELKTRLGQNPEDDEATYQLAVQQLASQQYESALDALLKLFVRNRNYADGL 259

Query: 276 MKKTFMDILTALGQGHPLANQYRKKLYSLLY 306
             KT + +   LG  H L  QYR+KLY  +Y
Sbjct: 260 AHKTLLQVFELLGNDHALVTQYRRKLYQAIY 290



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 7/136 (5%)

Query: 9   IVYSAMCHPNQGFAMQAAKIIDVSQHNFHQVLQHSTLSPVLFYFWAPISHESAELLPAIE 68
           ++  A C   +G   +A  ++D    + H+   +   + + F   A    ++AEL   + 
Sbjct: 157 LILYARCLAERGELTEAQTVLDAVSGDEHKQALNGAKAQLTFLRQAAELPDAAELKTRLG 216

Query: 69  QLTERYQGAFVLARLNCQEEQGIAAQFGIQAIPTIALFIEGKP-VDGLGGPQPIEAVEEM 127
           Q  E  +  + LA      +Q  + Q+       + LF+  +   DGL     ++  E +
Sbjct: 217 QNPEDDEATYQLA-----VQQLASQQYESALDALLKLFVRNRNYADGLAHKTLLQVFELL 271

Query: 128 LKRH-LPSDEERLMYQ 142
              H L +   R +YQ
Sbjct: 272 GNDHALVTQYRRKLYQ 287