Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., Outer membrane porin protein 32 precursor from Variovorax sp. SCN45

 Score = 47.4 bits (111), Expect = 7e-10
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 10/135 (7%)

Query: 8   TLLGAAVAMASTGAFAASETGAIGVLSDFNVQAY---GVAAISAFYQEDSNGYDYENESR 64
           TL G   A  S  +  A +  A    + F V  Y   G    S+  Q  ++GY   N SR
Sbjct: 24  TLFGVVDASISGYSATARDNRATVFPNQFGVPVYLNQGSVKTSST-QLANSGY---NSSR 79

Query: 65  IGFRASKDMFDNVNVFMQIESGYVGEDGK-GSTLGARDTFLGLQGDWGKVRFGRMLTPLY 123
           IGFR ++D+   +     +E+    +DG+ G +  AR + + L G +G++R GR  TP +
Sbjct: 80  IGFRGTEDLGGGLAASFWLEAPISNDDGQTGISTFARRSTVSLSGGFGEIRLGRDYTPTF 139

Query: 124 --EIVDWPYSNPGLG 136
             + V  P+   G+G
Sbjct: 140 WNDTVFDPFGTNGVG 154



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 13/91 (14%)

Query: 162 AFGGLTFNISAGRGDVG-------TKSSNHFGAAAHYNAADIVTFHVGYENNSNFKYDYK 214
           A G L   ++ G   +G       T   N     A Y+   +  F  G  + +  K DY+
Sbjct: 250 ANGPLDVALAYGSSTIGDQYYAGVTTKVNTLNLGASYDFGPVKLF--GEVSKAKNKNDYE 307

Query: 215 TKDTAGKDVDNTFLTDATAYIVGFELPLPAG 245
                G   D     D T Y++G  +P+ AG
Sbjct: 308 VTPILGGRPD----IDLTGYLIGVTVPVGAG 334