Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., porin from Paraburkholderia sabiae LMG 24235

 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 22/209 (10%)

Query: 37  NVQAYGVAAISAFYQEDSNG-------YDYENESRIGFRASKDMFDNVNVFMQIESGYVG 89
           +V  YG+      YQ ++ G             SR GFR  +D+   ++   Q+E+G+  
Sbjct: 24  SVTLYGLIDYGVNYQSNAGGGRVFGGSSGIMQGSRWGFRGVQDLGGGLSAIFQLENGF-- 81

Query: 90  EDGKGSTLG-----ARDTFLGLQGD-WGKVRFGRMLTPLYEIVD--WPYSNPGLGRVFDW 141
           + GKGS L       R  ++GL  D +G +  GR    L   V+     +N G G     
Sbjct: 82  DLGKGSALQGGLLFGRQAYMGLSSDKYGTLSVGRQYDSLVTFVESRMNSANYGGGTTAHP 141

Query: 142 GG-DVAGHYDRKGDIARYDSPAFGGLT----FNISAGRGDVGTKSSNHFGAAAHYNAADI 196
           G  D   +  R  +  +Y SP+FGG T    +      GD         GA   Y     
Sbjct: 142 GDLDNLNNSKRVNNSVKYTSPSFGGFTVGGVYGFGGQAGDFARNQIWSVGAGYDYGNFSA 201

Query: 197 VTFHVGYENNSNFKYDYKTKDTAGKDVDN 225
               +   N +   +     + AG +++N
Sbjct: 202 GAAFMNVRNPNQSYFTSTPTNVAGANLNN 230