Pairwise Alignments

Query, 349 a.a., chitoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Outer membrane protein (porin) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 27/265 (10%)

Query: 6   KRTLLGAAV--AMASTGAFAASETGAIGVLSDFNVQAYGVAAISAFYQEDSNGYDYENES 63
           K+TL+G A   A+A+TGA  A  T  +  + D  +Q    ++  A     S        S
Sbjct: 2   KKTLIGLAALGAVATTGAAFAQSTVTLSGIIDNGLQK--TSSGQALKMTPSRS----GTS 55

Query: 64  RIGFRASKDMFDNVNVFMQIESGYVGEDGK--GSTLGARDTFLGLQGDWGKVRFGRMLTP 121
                 S+D+   +    Q+ + +  +DG    + LG    F+GL GD+G VR GR    
Sbjct: 56  NWTLSGSEDLGGGLKAVFQVSTSFNSDDGTTAANVLGNNGMFVGLSGDFGTVRAGRPAHI 115

Query: 122 LYEIVDWPYSNPGL-GRVFDWGGDVAGHYD-RKGDIARYDSPAFGGLTFNISAGRGDVGT 179
           L+  V       G+ G       +V  +Y   + +  +Y SP++GGL   +     +   
Sbjct: 116 LWSNVLSANGTKGVSGYEASTALNVPQNYGVFQANAVQYLSPSWGGLRVQLEWTPSESDA 175

Query: 180 KSSNH-FGAAAHYNAADIVTFHVGYE------------NNSNFKYDYKTKDT--AGKDVD 224
            + N  +G A  Y+A  +    V Y             N     YD+         +D  
Sbjct: 176 AAENDGYGVALRYDAGPVSASFVNYRAPKVGAPKGEPVNQLGVAYDFGPAKAFFTYRDQA 235

Query: 225 NTFLTDATAYIVGFELPLPAGFGLA 249
               T   A++VG  +PL AG   A
Sbjct: 236 GLASTLDNAWVVGVNVPLGAGLAYA 260