Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., NAD-dependent DNA ligase LigB from Rhodanobacter sp000427505 FW510-R12

 Score =  126 bits (316), Expect = 3e-33
 Identities = 144/563 (25%), Positives = 227/563 (40%), Gaps = 56/563 (9%)

Query: 6   QRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGR 65
           Q L  L   L      Y VE    + DA YD+ M+ L   +   P   S+    L     
Sbjct: 33  QELAALHDRLDGWNHAYRVEGQSPVSDAVYDQAMQRLAGWQRCFPAQASAALAQLA---- 88

Query: 66  PLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVSLLY 125
             DA   V   +    L    D   +  +     DR   VQ       PK DG+AV+LLY
Sbjct: 89  --DAGGRVRSPVAQTGLTKLPDADAVGVWMHAHGDRDLWVQ-------PKADGVAVTLLY 139

Query: 126 ENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAGFEALN 185
            +G L +  +RGDG  G + T   + I +IP  L  A  P R  ++GE+           
Sbjct: 140 VDGQLRQVTSRGDGVHGSDWTARAQAIGAIPQHLPNA--PARAVLQGELVWRLPDHV--- 194

Query: 186 ARALKKGEKQFVNPRNAAAGSLRQ--LDSKITAQRPLAFYAYSVGVIEGGELATSHYQRF 243
                + +    N R+A AG+L +  LD    A+  L  + +  G             R 
Sbjct: 195 -----QADDGGANARSAVAGALAREALDPDSAARIGLFVWDWPSG-------PAGMPARL 242

Query: 244 LQLKGWGLP-ICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERLGF 302
             L   GL      T+ V +L EV+ + +     R ++ +  DG V++           +
Sbjct: 243 AGLAAMGLADSVAYTQRVATLDEVQRWRERWY--RHAMPFATDGTVLRQG--HRPPAADW 298

Query: 303 VARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHNAD 362
            A  P WA+A+K+P    L  +  V+F VGR+G ITPV +LEPV +    V   ++ +  
Sbjct: 299 QAAPPDWAVAWKYPVASALAEVRAVDFTVGRSGRITPVLELEPVQLDDHRVQRVSIGSLK 358

Query: 363 EIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVEGEA 422
               L +  GD V +  AG  IP++ SV    R +   ++  P          +    +A
Sbjct: 359 RWRELDIRPGDQVEVALAGLTIPRLQSVAW--RAQQRVAVTSP----------DPAVHDA 406

Query: 423 VARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLRAGEL 482
           ++  S    C  Q +  L     R+ + +EGLG    + L+D  +V    D   L   +L
Sbjct: 407 LSCWSPTPGCGQQFRARLVWLGGRQGLQLEGLGADTWQALIDAGLVHGLLDWMSLTPEQL 466

Query: 483 TILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLEAIQQAS 542
             +  +G   A  +  +   A+Q    ++L ALG+         N+A       A+    
Sbjct: 467 AGVPGLGASRAALLARSFAAARQRPFARWLQALGVPS-------NVAAGLPDWAALSARG 519

Query: 543 LEQFIEVPDVGVVVASHLQAFFA 565
            + +  +  +G   A+ L AFFA
Sbjct: 520 ADDWQALEGIGASRANQLVAFFA 542