Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., DNA ligase from Xanthobacter sp. DMC5

 Score =  574 bits (1479), Expect = e-168
 Identities = 327/701 (46%), Positives = 430/701 (61%), Gaps = 42/701 (5%)

Query: 2   SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61
           SD A     L + +  H   YY EDAP + DAEYD L R    +EA  P L+  DS S +
Sbjct: 19  SDAAAEHAALAEEIKGHDAAYYREDAPVVSDAEYDALRRRYEAIEARFPGLVGEDSLSAK 78

Query: 62  VGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTD--RIPAVQHSAFCCEPKLDGL 119
           VG  P + F  VVH +PMLSL + F D  +  F  R+     + +    AF CEPK+DGL
Sbjct: 79  VGAAPSEKFGKVVHGVPMLSLSSVFTDDAIFEFVARVKRFLSVNSDDQIAFTCEPKIDGL 138

Query: 120 AVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKA 179
           + SL YENG LT AATRGDG  GE++TENVRTI  +P +L   D P  ++VRGEV+M KA
Sbjct: 139 SCSLRYENGRLTVAATRGDGRQGEDVTENVRTIDDVPQQLFTNDVPELIDVRGEVYMAKA 198

Query: 180 GFEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSH 239
            FEALNAR    GE+ F NPRNAAAGSLRQLD  +TA RPL F+AY+ G  E   L    
Sbjct: 199 DFEALNARQSALGERVFANPRNAAAGSLRQLDPSVTASRPLKFFAYAWG--EASALPADT 256

Query: 240 YQRFLQ-LKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQE 298
               L     WG  I     +  +  E+   Y+ I + R SL Y+IDGVV KV+ + L+E
Sbjct: 257 QNGMLNAFDRWGFCINRLVTVARNAGELIDHYRKIEELRASLPYDIDGVVYKVNRLDLRE 316

Query: 299 RLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATL 358
           RLGFV+R PRWAIA+KFPA++  T+L  ++ QVGRTGA+TPVAKL PV VGGV V+NATL
Sbjct: 317 RLGFVSRTPRWAIAHKFPAEQATTVLEAIDIQVGRTGALTPVAKLLPVTVGGVVVANATL 376

Query: 359 HNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQS----- 413
           HN DEI R  + VGDTVV++RAGDVIPQ+V V+ E+RP  +K   FPT CP C S     
Sbjct: 377 HNEDEIARKDIRVGDTVVVQRAGDVIPQVVRVITEKRPAGSKPYEFPTLCPACGSHAVRE 436

Query: 414 -DVERVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPA 472
            D +  + +AV RC+GGLIC AQ  E L+HFVSR A D+EGLG+K +    D  ++++PA
Sbjct: 437 VDTKTGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYDWGLIASPA 496

Query: 473 DLFRLRAGELTILERM------GPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATAL 526
           D+F L A     L+R+      G  SA N+  A+   +   + +F++ALGIR VGE  A 
Sbjct: 497 DIFTLEARNKEGLQRLENREGWGKTSAANLFVAIQSRRNVAVDRFVFALGIRHVGETNAK 556

Query: 527 NLAQHFLSLEAIQQASL----------------EQFIEVPDVGVVVASHLQAFFAQDRNQ 570
            L +H+ ++EA++  +L                ++ + +  VG VVA  +  FF + RN+
Sbjct: 557 RLMRHYGTVEALEAGALAAAIPGEEHPKGNDAWQEMLAIDGVGDVVAEAVIEFFHEPRNR 616

Query: 571 QVINELLEQGITWPALTAAP---VAVDSALAGKIVVLTGSFTQLSRNDAKAALQALGAKV 627
           +V+  LL +      +T AP   VA +S +AGK VV TGS  +++R++AKA  + LGAKV
Sbjct: 617 EVVAALLAE------VTPAPMERVAAESPVAGKTVVFTGSLEKMTRDEAKAMAERLGAKV 670

Query: 628 TGSVSKNTDMVFAGEAAGSKLAKATELGIQVFDEQALIEFL 668
            GSVS  TD+V AG  AGSKL KA  LG++V  E    E +
Sbjct: 671 AGSVSAKTDLVVAGPGAGSKLEKAQALGVKVITEDEWFELV 711